Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g02662 ATGGGGATTCAGACGATGGGATCTCAAGGTAATGGGCAACAGTCTCATTTACAGCCTTCATCTTTGTCTAGGCAAGGTTCATGGTATAATCTTACTCTTGATGAGGTTAATAGTCAATTAGGAGACTTAGGGAAGCCATTAGGGAGCATGAACCTTGATGAGCTTCTTCAAAATGTGTGGACTGCTGAAGCAAGTAAGTCTTCCGTGATAGGCACGGATAGTCAGAACATGTCGTCCTCTTCCTCGCTTCAACGGCAGGCCAGCCTAACGCTCGCTCGTGCGTTGAGTGGGAAGACAGTGGATGATGTGTGGAGAGAAATTCAGCAAGGTCAGAAGAAAAGGTACGGAGAGGAAGTGAAAATTCAGGAGGTAGAAATGACTCTTGGTGAGACTACCTTGGAAGATTTCTTGGTGCAAGCAGGCCTTTTTGCTGAAGCTTCTATCAGTCCAGCTGTGGGATTGGATACAGTGGAGTGCTCCGCTGCTCAAGGTTTCCAGCAGAAAACAGGCCTGTCATCCTCCCCTTCTATTGGCAGCTTATCGGACACCCGACTGGGCCGGAAAAGGGATGCTCCTGATGCATATGAGAAAACTCTGGAAAGGAGGTTGAGGAGGAAAATCAAGAATAGGGAATCTGCTGCTCGGTCACGAGCTCGAAAACAGGCTTACCATAATGAACTGGTTGGTAAGGTTTCCCGTCTAGAAGAAGAAAATGTAAAGCTAAAGAGAGAGAAGGTACCAGACCACATTCATGTTTTCTTTTCACAACTATGTTCAACATTCCTTGTGTTTGTTATATAG 801 0.4607 MGIQTMGSQGNGQQSHLQPSSLSRQGSWYNLTLDEVNSQLGDLGKPLGSMNLDELLQNVWTAEASKSSVIGTDSQNMSSSSSLQRQASLTLARALSGKTVDDVWREIQQGQKKRYGEEVKIQEVEMTLGETTLEDFLVQAGLFAEASISPAVGLDTVECSAAQGFQQKTGLSSSPSIGSLSDTRLGRKRDAPDAYEKTLERRLRRKIKNRESAARSRARKQAYHNELVGKVSRLEEENVKLKREKVPDHIHVFFSQLCSTFLVFVI 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g02662 266 MobiDBLite consensus disorder prediction 1 21 - -
Spst6g02662 266 SUPERFAMILY Leucine zipper domain 201 244 IPR046347 GO:0003700|GO:0006355
Spst6g02662 266 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 199 244 IPR004827 GO:0003700|GO:0006355
Spst6g02662 266 Coils Coil 224 244 - -
Spst6g02662 266 Gene3D - 199 246 - -
Spst6g02662 266 SMART brlzneu 197 263 IPR004827 GO:0003700|GO:0006355
Spst6g02662 266 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 204 219 IPR004827 GO:0003700|GO:0006355
Spst6g02662 266 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 22 246 IPR043452 GO:0003700|GO:0045893
Spst6g02662 266 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 199 253 - -
Spst6g02662 266 Pfam bZIP transcription factor 201 244 IPR004827 GO:0003700|GO:0006355
Spst6g02662 266 MobiDBLite consensus disorder prediction 168 192 - -
Spst6g02662 266 CDD bZIP_plant_BZIP46 201 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g02662 Spst-Chr6 88040070 88040984 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g02662 6 246 bZIP Transcription Factor Family AT2G41070 47.692 3.56e-53 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Spst6g02662 bZIP_1 6.4e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g02662 K14432 - gmx:100798549 427.172