Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g02646 ATGTTACCCTTTTCATATGCAAGAGCTGAGTCTAAACTCCTCAAGGATATTGTTGAAGATGTTTTGCAAAAATTGGCTCCTATGTACCCTAAATGCCACAAAGGATTGGTTGGAATTGAGGAAAATTATGAAAAGATAGAGTCACTGCTAAACGTTGAGTCATATGAAGCTAAAATCTTGGGAATATGGGGCATGGGTGGAGTAGGTAAAAGCACCCTTGCTCGTGCTTTATATGACAAACAATCTCATGAGTTTGCAGGTCATTGCTTCCTTGAAAATGTAAGGGAAGAATCAGACAAGCATGGAGTCAAAGCTTTACGTAATAGACTTTTTTCTGAGTTAGGAAAACAGATAGATCATGCAACAAACATATTGGAAGCTTTTGATTTTTCTGCAACATCTGGAATAGAAGTCCTTCTGGACATAGTTCTAATAACAATTTCAGGTGGCGATCAACTAGAAATGCATGACTTGATACAAGAAATGGGTTGGGAAGTTGTTCATCAAGAATGTATCAAAGACCCTGGAAAACAAAGTGTTGAACATTCAAGGACTTGA 558 0.3763 MLPFSYARAESKLLKDIVEDVLQKLAPMYPKCHKGLVGIEENYEKIESLLNVESYEAKILGIWGMGGVGKSTLARALYDKQSHEFAGHCFLENVREESDKHGVKALRNRLFSELGKQIDHATNILEAFDFSATSGIEVLLDIVLITISGGDQLEMHDLIQEMGWEVVHQECIKDPGKQSVEHSRT 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g02646 185 Pfam NB-ARC domain 43 116 IPR002182 GO:0043531
Spst6g02646 185 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 119 IPR027417 -
Spst6g02646 185 Gene3D - 20 141 IPR027417 -
Spst6g02646 185 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 124 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g02646 Spst-Chr6 84905105 84907505 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g02646 37 106 WRKY Transcription Factor Family AT5G45050 40.000 9.31e-14 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g02646 - - vun:114187776 192.971