Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g02631 ATGGCCTCTTCCCACGTTCTCGAAAAAGACCCTAGCTCCAGATACGCCCGGTATGATGAAGTTTTGGGGAAAGGAGCCTTCAAGACTGTATACAAAGCGTTTGACGAAGTGGACGGAATCGAAGTTGCGTGGAACAGGATCAGCGGGGAGGACGTTGTGCAGACTCCGCAGCAGTTGGAGAAGTTGTACTCGGAGGTTCACTTGCTCAAGAACTTGAAGCACGATAATGTCATCAAATTGTACAATTATTGGGTTGATGATACCACCGCCACTGTCAACATGATCACTGAGTTGTTCACCTCCGGGAGTTTGAGGCAGTACCGCAAGAAGCATAAGCATGTGGATATGAAAGCCATTAAGAACTGGGCCCGGCAGATTCTCCGTGGCTTGTGCTTTCTGCACAGTCAAACTCCTCCTATTATTCACAGGGACCTGAAATGTGACAATATTTTTGTCAATGGGAATAGTGGACTGGTGAAGATTGGAGATCTTGGATTGGCAATTGTTATGCAACAGCCTACTGCCCGTAGTGTCATCGGTACACCGGAGTTCATGGCCCCAGAACTTTATGAGGAGGAGTACAATGAACTAGTTGACATATATTCCTTTGGCATGTGCATCTTAGAAATGATCACCTGCGAGTACCCATATAGTGAATGTAAAAATCCAGCTCAGATATATAAGAAAGTTACCTCTGGTATAAAGCCAGCTGCTCTTGCTAAAGTAAATGATCCTCAAGTTAAGCAATTCATAGAGAAGTGTCTAGTTCCAGCATCTGCTAGATTGTCGGCATCTGAACTACTGAAAGACCCATTCCTTGCAACTGAAAATGCAAAGGAGATCAATCATGATACACTTCAGCTACCTAATAATCCTCAAACCAAATCGGGGAATCCACCACTGTGCAAGCCTCATCCCATGGAGATAGATTCTAACTCCAGGCGTACTTCACCTGGCTCGTCTGTGGGTAGAATTGAAGAAACTTCTCTGGTTACAACTTTTGATCTTGTGAGGATGACTGAAAATAACGAATTCAGGTTAAGAGGGGAGAAAAATGCTGAAAGTACAATTTCACTTACACTGCGAATTGCAGATGCACGTGGTGGAGCAAGGAATATCCATTTTCCATTCTATGTCGATTCTGATACAGCAATTTCCATTGCTGAGGAGATGGTGGAACATCTGGAACTTACAAACGAGGACGTATCTGTCATTGCGGAGCTAATACAAGACATGATTGTTAAGCTCGAGCCCACCTGTAAGCCCTTATGTGAGAACCTCTCATCTGGAACAGAGCATTTGTACGCAACTTCTTCAGAAGTTCAGAATGATGGACAATTGAGCTGCCATTGGCCATTACAATCAAGTGATTATGATATGAAGACGATGTACGAGGATCTAGTTCGCTCACGGCCTGTGGATGGAGGTGATCAGGAGAAACAAGAATCTGTTATGTCAGATATATCAGCAGAGTGTGGGATTCCGATGGCTTCAGATTCTAAAGGTGTCGAGCCTGACATTTTTATTTTTGATGAATTCTGGGAGGGGTTCGATGTAGTATTCAATTCCAATTCAGATGGCAGGTTTAGTGGGCAAGAGGATGGGCAAAAGAATCAATCAGAGAATTCAGCAGGCTCTCTAATCAATTCATGTTGCAGCCCATCCAAAAACTTTGACATGTCAAGCACAGGTTCTCTTAATCTAGTTGACAAAGATCCTTCAGACGAGCTGCAGCTGGAGCTTGAAGCAATAGAAACACAATATCAACAATGCTTTCGTGATCTTATGAAAATGAGGGAGGAAGCCATAGAAAATGCAAAAAGGAGATGGATAACAAGGAAGAAGATACCAGTTATGTGA 1860 0.4349 MASSHVLEKDPSSRYARYDEVLGKGAFKTVYKAFDEVDGIEVAWNRISGEDVVQTPQQLEKLYSEVHLLKNLKHDNVIKLYNYWVDDTTATVNMITELFTSGSLRQYRKKHKHVDMKAIKNWARQILRGLCFLHSQTPPIIHRDLKCDNIFVNGNSGLVKIGDLGLAIVMQQPTARSVIGTPEFMAPELYEEEYNELVDIYSFGMCILEMITCEYPYSECKNPAQIYKKVTSGIKPAALAKVNDPQVKQFIEKCLVPASARLSASELLKDPFLATENAKEINHDTLQLPNNPQTKSGNPPLCKPHPMEIDSNSRRTSPGSSVGRIEETSLVTTFDLVRMTENNEFRLRGEKNAESTISLTLRIADARGGARNIHFPFYVDSDTAISIAEEMVEHLELTNEDVSVIAELIQDMIVKLEPTCKPLCENLSSGTEHLYATSSEVQNDGQLSCHWPLQSSDYDMKTMYEDLVRSRPVDGGDQEKQESVMSDISAECGIPMASDSKGVEPDIFIFDEFWEGFDVVFNSNSDGRFSGQEDGQKNQSENSAGSLINSCCSPSKNFDMSSTGSLNLVDKDPSDELQLELEAIETQYQQCFRDLMKMREEAIENAKRRWITRKKIPVM 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g02631 619 CDD STKc_WNK 14 273 - -
Spst6g02631 619 Gene3D Transferase(Phosphotransferase) domain 1 99 281 - -
Spst6g02631 619 Pfam Protein kinase domain 19 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g02631 619 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 357 413 IPR024678 GO:0004674|GO:0005524
Spst6g02631 619 SMART serkin_6 16 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g02631 619 SUPERFAMILY Protein kinase-like (PK-like) 19 309 IPR011009 -
Spst6g02631 619 ProSiteProfiles Protein kinase domain profile. 16 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g02631 619 MobiDBLite consensus disorder prediction 283 298 - -
Spst6g02631 619 FunFam Probable serine/threonine-protein kinase WNK1 1 97 - -
Spst6g02631 619 Gene3D Phosphorylase Kinase; domain 1 2 97 - -
Spst6g02631 619 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 7 596 - -
Spst6g02631 619 Gene3D - 355 450 - -
Spst6g02631 619 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Spst6g02631 619 FunFam probable serine/threonine-protein kinase WNK9 99 278 - -
Spst6g02631 619 Coils Coil 574 601 - -
Spst6g02631 619 MobiDBLite consensus disorder prediction 283 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g02631 Spst-Chr6 83891631 83894813 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g02631 1 618 MAP Kinase Kinase Kinase AT5G41990 53.398 0.0 586
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Spst6g02631 Pkinase 3.6e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g02631 K08867 - gmx:100272202 1020.38