Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g02623 ATGGGAGGGACTGGTGAGCAAAGCCAAAACTACTCTACCAACCCCGCCGACTACAAGCTTCTAGAAGAAGTTGGTTATGGCGCCACCGCCACCGTCTACAGAGCCATCTATCTTCCCTTTAACCAAGTCGTGGCTATCAAGTGCTTGGATCTCGATCGTTGTAACATCAATCTCGATGATTTGCGCAGGGAAGCCCAAACGATGAGTCTGATCGATCACCCAAACGTGGTGAAGGCGTACTGCTCCTTCGCGGTGGAGCGGAATCTGTGGGTGGTGATGCCGTTCATGGACGAGGGCTCCTGTTTGCATCTCATGAAGATTGCTTACACCGACGGCTTCGAGGAAGACGCAATCGGATCCATCCTGAAAGAAACTCTGAAGGCCCTGCAGTACCTCCACCACCATGGCCACATTCATCGGGACGTCAAGGCCGGCAACATTTTACTCCACAGCAACGGAGCCGTCAAGCTCGCCGACTTCGGTGTCGCCGCGTGCTTGTTTGACGCCGGTGACAGGCAGCGGTGCAGAAACACTTTTGTCGGGACCCCTTGCTGGATGGCTCCTGAGGTGCTGCAACCTGGAACTGGCTATAATTCCAAGGCTGATATTTGGTCTTTTGGGATTACCGCACTTGAGTTGGCTCATGGTCATGCACCATTTTCAAAATATCCTCCAATGAAGGTTCTTCTAATGACCATACAGAATGCCCCTCCTGGACTTGATTATGATCGTGATAAAAAGTTCTCAAAGTCCTTTAAGGAAATGGTTGCTATGTGCCTAGTGAAAGATCAAACAAAAAGGCCATCAGCAGAGAAGTTAATGAAACATTCCTTCTTCAAACATGTTAAGCCTCCCGAGCTCTCTGTAAAGAAATTGTTTGCTGATTTACCACCTCTATGGAATCGCGTAAAAGCCCTCCAGCTCAAAGATGCAGCTCAACTAGCAGTCAAGAAAATGCCTTCTGCAGAAGAAGAGGCAATATCTCAGAGTCAATACCATCGAGGAGTTAGTGCGTGGAACTTTGATATCGATGATTTGAAAGCTCAAGCTTCATTGGTGACGGATGATGATGATATTACTGGTACGAGGGAAGATGTAAACGATTTTGTCACCAATTACAAGGCTGGTGCAGTTGATTCCCAGTCTGGTACCGGCAACATGATTTCAGATAAGGCATCGCTGAATAAAATCACATCACGGGTAGGGGCTATTGACATAAAACAGACTGAGCAGAGTGAATACTTGAACAGAAAGGAGAAAATTCTTGAAAGCGATATCCAGGAACATGGATTGCCCAAAAATATCATTTGGAAGAGAAATGGGTCAATTCGAGAGGCAACGACATCTACCCTAGAGAAAGATATAGGCATGAGCAAAATTAAAAAAGGCCAATCGGTGAAAACCCGTCAAACCCAAAGTGGACCACTATTGCCAGTCACAGTTCTCAGCCATTCTAAATCAGAAAGGGGACGAACATTAGAAAGACTGTTTGATGAAATGAAGCGAGTTCCTGTTATAGTTGACAAACCGGATGGATTCTTGGCTTGGCCAAGATGGCTTAAACTTTGGCAAACTCCTAAGGATATGGCTCACCTTAGAAGGGCTCTTGGAAAACCGCCACTTGAGATATGA 1632 0.4657 MGGTGEQSQNYSTNPADYKLLEEVGYGATATVYRAIYLPFNQVVAIKCLDLDRCNINLDDLRREAQTMSLIDHPNVVKAYCSFAVERNLWVVMPFMDEGSCLHLMKIAYTDGFEEDAIGSILKETLKALQYLHHHGHIHRDVKAGNILLHSNGAVKLADFGVAACLFDAGDRQRCRNTFVGTPCWMAPEVLQPGTGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPSAEKLMKHSFFKHVKPPELSVKKLFADLPPLWNRVKALQLKDAAQLAVKKMPSAEEEAISQSQYHRGVSAWNFDIDDLKAQASLVTDDDDITGTREDVNDFVTNYKAGAVDSQSGTGNMISDKASLNKITSRVGAIDIKQTEQSEYLNRKEKILESDIQEHGLPKNIIWKRNGSIREATTSTLEKDIGMSKIKKGQSVKTRQTQSGPLLPVTVLSHSKSERGRTLERLFDEMKRVPVIVDKPDGFLAWPRWLKLWQTPKDMAHLRRALGKPPLEI 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g02623 543 SUPERFAMILY Protein kinase-like (PK-like) 17 332 IPR011009 -
Spst6g02623 543 CDD STKc_OSR1_SPAK 17 279 - -
Spst6g02623 543 ProSiteProfiles Protein kinase domain profile. 18 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g02623 543 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Spst6g02623 543 SMART serkin_6 18 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g02623 543 Gene3D Phosphorylase Kinase; domain 1 6 95 - -
Spst6g02623 543 Gene3D Transferase(Phosphotransferase) domain 1 99 330 - -
Spst6g02623 543 FunFam serine/threonine-protein kinase BLUS1-like isoform X2 99 329 - -
Spst6g02623 543 Pfam Protein kinase domain 18 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g02623 543 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 9 487 IPR047173 GO:0043539
Spst6g02623 543 FunFam Serine/threonine-protein kinase BLUS1 7 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g02623 Spst-Chr6 83528639 83538113 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g02623 6 510 MAP Kinase Kinase Kinase Kinase AT4G24100 64.554 0.0 672
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Spst6g02623 Pkinase 2.7e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g02623 - - pvu:PHAVU_004G089900g 843.958