Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g02594 ATGGAGACTCTTTCTTCTTTCAGTTTTGTACCCCTTTGCATGCTCTTGCTCCTTGTGTGTCTCACTAGTCCTGCTTATGTTTCTTCACTTCCACTTTCGTTGAGAAGGCAAGCTTCTATCCTTGTATCTATGAAGCAAGAGTTTGGAGTAGCTAACACTTCTCTCAGAAGCTGGGACATGTCAAACTACTCGTCGCTTTGCAGTTGGTATGGCATTCAGTGTGACCATGACAACATGTCTGTGGTGTCACTTGACATATCCGGTTTGAATGCTTTAGGGTCAGTTTCACCTGCCATCACAGGACTCTCGAGCCTTGTGAGTGTGTCACTCCAGGGAAATGGCTTCTCTGGGGAGTTTCCAAGTGACATCCACAAGCTACCAAGGTTGAGGTTCCTCAACATGTCCAGCAACATGTTCAGTGGGAATTTGAGTTGGAAATTCTCCCAGCTAAAGGAGCTTGAAGTGGTGGATGCTTACGACAATGCTTTCAATGGCTCACTTCCTCTGGGTGTCATTGATCTCCCAAAGATCAAGCACTTGAACTTTGGAGGGAACTTCTTCTCTGGGGAAATTCCTCCAAGCTATGGAAACATGTGGCAGCTCAACTTTCTGTCCCTTGCAGGGAATGATTTGAGAGGCTTCATACCAAGTGAGCTTGGGAATCTCACCAACCTTACTCATCTTTACTTGGGATACTACAATCAGTTTGACGGTGGAATCCCTCCTCAGTTTGGTAAGCTGACCAATTTGGTTCATCTAGACATTGCAAACTGTGGCTTGACAGGTCCAATTCCCGTCGAGTTGGGAAACCTCAATAAGTTAGACACACTCTTCTTGCAAACCAATCAGCTTAGTGGTTCAATCCCTCCCCAGCTAGGAAACTTGACTAGGTTAAAAGCTCTTGATCTATCATTCAACATGCTCACAGGAGGCATCCCTGATGAGTTCTCAGCCCTTCATGAACTTACCCTCTTGAACTTGTTTATAAACAAGTTGCATGGAGAAATTCCTCACTTCCTTGCTGAGTTACCAAACTTGGAGACTCTGAAGATTTGGCAGAACAACTTCACAGGAGTGATTCCTTCAAATCTTGGCAAGAATGGCAGGTTGATTGAGCTTGATTTGTCAACAAATAAGCTCACTGGTTTGCTTCCAAAATCTCTATGCCTCGGAAAGAGGCTGAAAATTTTGATCCTGCTCAAGAACTTTCTGTTTGGATCTTTGCCTGAGGATCTTGGTCAATGCCACACACTCCAAAGAGTCCGTTTGGGTCAGAACTATTTAACTGGGCCATTGCCACGTGGGTTTCTCTATTTGCCTGAACTAACACTTGTGGAGCTACAGAACAATTATCTTAGTGGTGGCTTCCCACAATCAACAAGAAGCACTCCCTCCAAACTAGCACAATTGAACCTATCAAACAACCGCTTCTCAGGGTTTCTTCCAGCCTCAATTTCAAATTTTCCAAACTTACAAATTCTTCTGCTTAGTGGAAACAGATTCTCAGGAAAAATCCCACCAGATACAGGGAGGTTGAAAAGTATCCTCAAGTTGGATATAAGTACCAACAACTTTTCAGGTACTATTCCACCTGAGATAGGTAATTGTGTCCTACTCACCTATTTAGATTTCAGCCAAAACCAACTATCGGGTCCCATTCCAGTCCAAATTGCTCAAATTCACATATTAAACTATCTTAATGTCTCATGGAACCACCTAAACCAAAGCCTTCCCAAGGAACTTAGGGCCATGAAGGGCTTAACTTCAGCAGATTTCTCTCACAATAACTTCTCAGGTTCAATACCTGAGGGGGGGCTATTCTCAATCTTTAATTCTACATCCTTTGTGGGTAACCCTCAACTATGTGGCTATGACTCCAAGCCATGCAACCTTTCTTCAACAGCTGCTTTGGAGTCTCAAGAAAAAAAGAGTGCAAAACCTGGGGTCCCCGGGAAGTTCAAGTTCCTTTTTGCATTGGCATTGTTGGTGTGCTCATTGGTATTTGCAACCTTGGCCATCATCAAGAGTAGAAAGACAAGGAGGCACTCCGATTCATGGAAGTTAACAGCATTCCAGAAGCTGGAATATGGGAGCGAGGACATCATAGGGTGCATAAAGGAAAGCAATGTCATTGGAAGAGGTGGATCTGGGGTTGTGTACAGAGGAACCATGCCAAATGGAGAGGAAGTGGCAGTGAAGAAGCTGTTAGGAATCAACAAAGGATCTTCCCATGACAATGGCCTCTCTGCAGAAATAAAAACTTTAGGGAGAATCAGACACAGGTACATTGTGAGGTTGCTAGCATTTTGCTCAAACAGAGAGACCAATTTGCTTGTCTATGATTACATGCCAAATGGAAGCTTGGGTGAAGTCTTGCATGGGAAGAGGGGTGAGTTTCTCAAGTGGGACACTAGGCTCAAAATAGCCATAGAAGCTGCAAAAGGACTTTGTTATTTGCACCATGATTGTTCCCCTTTGATAATCCATAGAGATGTCAAGTCAAACAACATACTGCTGAACTCTGATTTTGAGGCTCATGTTGCTGATTTCGGGCTTGCCAAGTTCATGCAAGGCAATGGGGCATCAGAGTGCATGTCTTCCATTGCTGGTTCTTATGGCTATATTGCTCCAGAATATGCATACACATTGAAAGTGGATGAGAAAAGTGATGTTTACAGCTTTGGAGTGGTGCTTCTAGAACTCATAACAGGGAGAAGGCCAGTGGGGGATTTTGGGGAAGATGGACTAGATATTGTTCAATGGAGCAAGATGCAAACCAATTGGAACAAAGAGATGGTGATGAAGGTCCTTGATGAGAGGCTACATCACATTCCTTTGGCTGAAGCAAAGCAGGTGTTTTTTGTTGCAATGTTGTGTGTTCATGAACACAGTGTGGAGAGACCAACCATGAGGGAAGTGGTTGAAATGCTTGCACAAGCAAAACAACCAAATACATTTCAGATAATCTAG 2970 0.4374 METLSSFSFVPLCMLLLLVCLTSPAYVSSLPLSLRRQASILVSMKQEFGVANTSLRSWDMSNYSSLCSWYGIQCDHDNMSVVSLDISGLNALGSVSPAITGLSSLVSVSLQGNGFSGEFPSDIHKLPRLRFLNMSSNMFSGNLSWKFSQLKELEVVDAYDNAFNGSLPLGVIDLPKIKHLNFGGNFFSGEIPPSYGNMWQLNFLSLAGNDLRGFIPSELGNLTNLTHLYLGYYNQFDGGIPPQFGKLTNLVHLDIANCGLTGPIPVELGNLNKLDTLFLQTNQLSGSIPPQLGNLTRLKALDLSFNMLTGGIPDEFSALHELTLLNLFINKLHGEIPHFLAELPNLETLKIWQNNFTGVIPSNLGKNGRLIELDLSTNKLTGLLPKSLCLGKRLKILILLKNFLFGSLPEDLGQCHTLQRVRLGQNYLTGPLPRGFLYLPELTLVELQNNYLSGGFPQSTRSTPSKLAQLNLSNNRFSGFLPASISNFPNLQILLLSGNRFSGKIPPDTGRLKSILKLDISTNNFSGTIPPEIGNCVLLTYLDFSQNQLSGPIPVQIAQIHILNYLNVSWNHLNQSLPKELRAMKGLTSADFSHNNFSGSIPEGGLFSIFNSTSFVGNPQLCGYDSKPCNLSSTAALESQEKKSAKPGVPGKFKFLFALALLVCSLVFATLAIIKSRKTRRHSDSWKLTAFQKLEYGSEDIIGCIKESNVIGRGGSGVVYRGTMPNGEEVAVKKLLGINKGSSHDNGLSAEIKTLGRIRHRYIVRLLAFCSNRETNLLVYDYMPNGSLGEVLHGKRGEFLKWDTRLKIAIEAAKGLCYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKFMQGNGASECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEDGLDIVQWSKMQTNWNKEMVMKVLDERLHHIPLAEAKQVFFVAMLCVHEHSVERPTMREVVEMLAQAKQPNTFQII 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g02594 989 Gene3D Ribonuclease Inhibitor 146 236 IPR032675 -
Spst6g02594 989 SMART serkin_6 705 977 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g02594 989 Pfam Leucine Rich Repeat 297 319 IPR001611 GO:0005515
Spst6g02594 989 Gene3D Phosphorylase Kinase; domain 1 676 782 - -
Spst6g02594 989 ProSitePatterns Serine/Threonine protein kinases active-site signature. 827 839 IPR008271 GO:0004672|GO:0006468
Spst6g02594 989 Gene3D Ribonuclease Inhibitor 237 339 IPR032675 -
Spst6g02594 989 SUPERFAMILY RNI-like 83 405 - -
Spst6g02594 989 Pfam Leucine rich repeat 440 501 IPR001611 GO:0005515
Spst6g02594 989 FunFam Receptor-like protein kinase 2 192 290 - -
Spst6g02594 989 ProSitePatterns Protein kinases ATP-binding region signature. 711 734 IPR017441 GO:0005524
Spst6g02594 989 SUPERFAMILY L domain-like 368 627 - -
Spst6g02594 989 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 783 988 - -
Spst6g02594 989 FunFam Uncharacterized protein 34 191 - -
Spst6g02594 989 Gene3D Ribonuclease Inhibitor 340 636 IPR032675 -
Spst6g02594 989 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 200 979 - -
Spst6g02594 989 Gene3D Transferase(Phosphotransferase) domain 1 783 987 - -
Spst6g02594 989 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 674 782 - -
Spst6g02594 989 Pfam Leucine rich repeat N-terminal domain 37 75 IPR013210 -
Spst6g02594 989 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 347 633 - -
Spst6g02594 989 Gene3D Ribonuclease Inhibitor 36 145 IPR032675 -
Spst6g02594 989 ProSiteProfiles Protein kinase domain profile. 705 985 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g02594 989 SUPERFAMILY Protein kinase-like (PK-like) 699 977 IPR011009 -
Spst6g02594 989 Pfam Protein tyrosine and serine/threonine kinase 707 977 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g02594 Spst-Chr6 79701856 79706220 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g02594 23 979 Receptor kinase-like Gene Family AT5G65700 56.608 0.0 1080
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Spst6g02594 PK_Tyr_Ser-Thr 1.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g02594 - - gmx:100803075 1793.86