Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g02499 ATGCTTAATTTGCATTGCAGCCTCGATGGAACTAGTAGGCCTACCCATTACCATGTGCTGCTAGATGAAGTTGGTTTCTCTCCAGATCAGCTGCAGGAGCTTGTCCATTCATTATCATATGTGTATCAGAGGAGCACTACTGCCATTTCTGTTGTTGCCCCAATATGCTATGCACACTTGGCTGCATCCCAGCTGGGACATTTCATGAAATTTGAGGACAAGTCTGAGACAACTTCAAGCCATGGTGGAGTGAGTGGTTCTGGTGCTGTTCCCGTCCCTCAGTTGCCTCCGTTGCAGGACAATGTGCGAAACACAATGTTCTTTTGTTGA 330 0.4697 MLNLHCSLDGTSRPTHYHVLLDEVGFSPDQLQELVHSLSYVYQRSTTAISVVAPICYAHLAASQLGHFMKFEDKSETTSSHGGVSGSGAVPVPQLPPLQDNVRNTMFFC 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g02499 109 ProSiteProfiles Piwi domain profile. 1 70 IPR003165 GO:0003676
Spst6g02499 109 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 5 72 - -
Spst6g02499 109 MobiDBLite consensus disorder prediction 75 95 - -
Spst6g02499 109 Pfam Piwi domain 2 70 IPR003165 GO:0003676
Spst6g02499 109 Gene3D - 1 109 IPR036397 GO:0003676
Spst6g02499 109 SUPERFAMILY Ribonuclease H-like 5 68 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g02499 Spst-Chr6 61024121 61025060 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g02499 5 109 Eukaryotic Initiation Factors Gene Family AT5G43810 39.815 1.16e-22 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g02499 K11593 - gmx:100820376 184.882