Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g02441 ATGAAATTAAGAGGTATTGGTGGAGGTGCGGGTGGCAAGATCGACCTGTGGTGGCTCGAAGCACGACGAAGGTGTTGTATGGGAACTCGCGCAGTGGTGGTTGTGAGGAAGATGGTGAGTGAGGCGAGGGTGGTGCGGAGAGAAGATTTGGGATGTTGGGTGAATGGGGTCTGCCGAAGGAGGAGGAGAGAAAAGGGTATTTGGCTGATGCGAGTTATTAGAGGATATAAAAGCAAAAAGGAATATGCAGCTTTGCTTCAGAGACATAGGGCTGCTGTTATTATACAGAAGCGGATTAAAACAGTACTTGCAACGAACAAAATGATAAGTAATGATGCTTCAGACACATCTACAGGGGCACGCCGAGGCGGCATCTGGATCTGTGTGTTGGGATTCGGTGGGCGAAGAAGGGGATTGGTGGCGGACCTGAGGCTTCCTCAGGGTGGAATCCTGCTGGAGGAAATTGTCATATGCCCTATGGAGGATGACAATAGAATCCTTAGAAATGGTAATAGCAATGGGTTGAACCCAAGTGTGAGCATGATGGGCAGGGGCAAAGTGAGACCAGAATTTTGTGTGAAGGCCCCACTAGTTGAAGCAACACTACAGACTAGGTGGTCTTCTAGAATAAGGTTCAAGATGACCTAA 648 0.4861 MKLRGIGGGAGGKIDLWWLEARRRCCMGTRAVVVVRKMVSEARVVRREDLGCWVNGVCRRRRREKGIWLMRVIRGYKSKKEYAALLQRHRAAVIIQKRIKTVLATNKMISNDASDTSTGARRGGIWICVLGFGGRRRGLVADLRLPQGGILLEEIVICPMEDDNRILRNGNSNGLNPSVSMMGRGKVRPEFCVKAPLVEATLQTRWSSRIRFKMT 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g02441 215 ProSiteProfiles IQ motif profile. 62 91 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g02441 Spst-Chr6 54378500 54380907 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g02441 58 168 Myosins gene family AT1G50360 32.558 1.29e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g02441 - - gmx:100796522 83.1889