Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g02422 ATGGCTACCATTTCACTCAGGCATAACCCTCAAGTGAACAACACTAACCAGCAACGTGAAATCATCACTGAAGAAATCCAAGGACTCATAAGAGTCCACAGAGATGGACGTGTAGAAAGGCCACCAATTGTGCCTAGTGTCTCCTGCACAGTGGCATCATCATCAGAACGTGGTGTCACACCCAAAGATGTTATCATCAACAAAGAGACCAACTTATGGGCACGTGTTTATGTGCCAATTAGTTCTCACACAAAGCCTCTTCCTTTGCTTGTGTACTTCCACGGTGGTGGATTCTGTGTTGGTTCTGCTGCTTGGAGCTGTTACCATGAGTTCCTGACCCACCTTGCTTCCAAAGCAAACTGTGTCATTCTCTCCGTGGATTATCACTTAGCCCCAGAGAACCGACTTCCTATGGCATATGATGATGGTTTCAACGCTCTCGCGTGGGTGAAAAGAGAAGCACTGAATACCTCCAGTGTGCAAAAGTGGTGGCTGAATCATTGCAACATGTCTTCCCTTTTCCTAGCTGGTGATAGTGCAGGTGCCAACATAGCTTATAATGTGGCCACACGCATGGGATTAGCATCAAACACACCAATGACACCATTATCTCTCAAGGGTATTATATTGATCCAACCTTTCTTTGGAGGAGAAGAAAGAACTAGCTCTGAGAAGCATTTCCTTCAGCCACCCAATTCAGCACTCACTTTATCCGTTTCTGACACTTATTGGCGCTTAGCACTTCCTCTTGGAGCTACTCGTGATCACCCATATTGCAACCCTCTTGCACATGGCACGGTCAAGTTGAGAGACTTGAGGGTTTCATCCATTATGATGTGCGTTTCAGAAATGGATATTCTGAGAGATAAGAACTTGGAATTCTCAAACGCTTTGGCTAAAGCAGGGAAAAGGGTTGAAACAGTTGTTTACAAAGGCGTAGGCCATGCATTCCAAGTACTGCATAATTACCAGCTTTCCCATTCCCGAACCCAAGAAATGATAGCCCATATCAGGAACTTTCTTAACCAGTAA 1032 0.4506 MATISLRHNPQVNNTNQQREIITEEIQGLIRVHRDGRVERPPIVPSVSCTVASSSERGVTPKDVIINKETNLWARVYVPISSHTKPLPLLVYFHGGGFCVGSAAWSCYHEFLTHLASKANCVILSVDYHLAPENRLPMAYDDGFNALAWVKREALNTSSVQKWWLNHCNMSSLFLAGDSAGANIAYNVATRMGLASNTPMTPLSLKGIILIQPFFGGEERTSSEKHFLQPPNSALTLSVSDTYWRLALPLGATRDHPYCNPLAHGTVKLRDLRVSSIMMCVSEMDILRDKNLEFSNALAKAGKRVETVVYKGVGHAFQVLHNYQLSHSRTQEMIAHIRNFLNQ 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g02422 343 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 173 185 IPR033140 -
Spst6g02422 343 PANTHER ARYLACETAMIDE DEACETYLASE 25 322 - -
Spst6g02422 343 Gene3D alpha/beta hydrolase 27 343 IPR029058 -
Spst6g02422 343 Pfam alpha/beta hydrolase fold 90 318 IPR013094 GO:0016787
Spst6g02422 343 SUPERFAMILY alpha/beta-Hydrolases 26 343 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g02422 Spst-Chr6 52271028 52272059 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g02422 1 342 Carbohydrate Esterase AT5G16080 52.707 1.80e-124 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g02422 - - gmx:100819429 609.372