Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g02408 ATGAACCCATTTGCAAGTAATCCTCCTGCTAGGCCTCCAAGCTCCACCTATCGCCCAGTGGCCCAACTTGTCGACTCCTCCATGAAGGTCTTCGTTGTCAGTGTTCCTCCAAATAGGGACATCATGGAGTCCATCTTGGAGATTGCTCATAGGGACCATGTTAGTATCGCCATTCTTAGTGCCTCTGGCACGATTAGAAATGTGACCCTACGCAACTCCACCCATAGCAGTATTCCTACACGCGGGCCCTTCACCTTACTCTCCCTCTCTGGTTCCTACATATATAACATCCTCCACACCCTTCATCCCGGAGCCACCCCTCCCTTCCCTTTGTCTTTCGCGATCAATCTCTCAACCCCTCATGGGCAAATCTTTGGTGGTGTGATCAGTGGCAGTGTAATTGCCGGTGAGAATGTTACCCTAACAGTCTCCACCTTTAACAATAGATGTCTTTGA 456 0.4978 MNPFASNPPARPPSSTYRPVAQLVDSSMKVFVVSVPPNRDIMESILEIAHRDHVSIAILSASGTIRNVTLRNSTHSSIPTRGPFTLLSLSGSYIYNILHTLHPGATPPFPLSFAINLSTPHGQIFGGVISGSVIAGENVTLTVSTFNNRCL 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g02408 151 SUPERFAMILY AF0104/ALDC/Ptd012-like 26 148 - -
Spst6g02408 151 CDD DUF296 29 136 IPR005175 -
Spst6g02408 151 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 11 148 IPR014476 GO:0003680
Spst6g02408 151 ProSiteProfiles PPC domain profile profile. 25 151 IPR005175 -
Spst6g02408 151 Gene3D - 27 150 - -
Spst6g02408 151 Pfam Plants and Prokaryotes Conserved (PCC) domain 29 147 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g02408 Spst-Chr6 50337151 50337606 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g02408 8 148 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 32.667 7.16e-19 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g02408 - - pvu:PHAVU_006G031200g 202.216