Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g02295 ATGCCTACTCAACTACTTATGATGGACGGAGTAGGTTTACCCGAAGCTGCTTTTTATATTTGTCTCGCTTCCTTAGTTGACTTTCCAACTAGGGTTTTCAACTTAACATTGAATGAGAAAGTGAAGGGGTTCGCGGGGCACAGATGGGTGGTGTTTGTGTGCGCGATGTGGGACATGGCATTCGCAGGCACCTCTTACATGTTCGGGAGCATATCGCCGGTGATAAAGAGCAGCATGGGTTTCAACCAGAAGCAGGTGGCGTTGTTGAGCATGGCCAAGGATTTGGGTGACAACGTTGGTCTTCTTGCTGGCAAAATCAGCCTGTTTTCCCCCATTTGGGCTCTCTTTCTCGTTGGGATCTTCCAAAAATGTTCTCGGTTATGGCCTTGTTTAGCTTCTCGTCACGCACCGCATTCGGTCTCTACCTTTCTGGCAGTTTGA 441 0.4853 MPTQLLMMDGVGLPEAAFYICLASLVDFPTRVFNLTLNEKVKGFAGHRWVVFVCAMWDMAFAGTSYMFGSISPVIKSSMGFNQKQVALLSMAKDLGDNVGLLAGKISLFSPIWALFLVGIFQKCSRLWPCLASRHAPHSVSTFLAV 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g02295 146 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 49 132 - -
Spst6g02295 146 Pfam Nodulin-like 48 122 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g02295 Spst-Chr6 37018867 37020383 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g02295 36 123 Nodulin-like Gene Family AT3G01930 57.955 8.82e-29 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g02295 - - gmx:100817909 155.606