Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g02283 ATGGATTCAAACCAGACACTCTTCTCTTCGGTCACGTTGTTGCAAGACTTACCATCAATCCGACATGAGATATACAATGTGTGCATGAATCAACCAATGAAGATAGTATCTGATGGCATATGGAATCCCCATGCAAGTGCAATACCTTCACAATCTGCATACACCATGCTTCAGCTTCAAATGGTCATCATCTTCATCGTCACGCAAGCTATTCATTTCATTCTCAAACAATTTGGGATCCCTCCTTTCGTTTCACAAGTCATGGCTGGCTTTCTGATGGGCCCATCAATTCCCACAGGACCATTGGAAAAGTACAAGAGGATGCTGTTCCCCTTGGGGAGTGCAGATATCCTAAGCACAGTCTCATCCTTAGGCTATTCATTTTTCCTCTTCATAAACTCAGTGCAGATGGACCTATCCTTGATCACCAAAACAGGGAGAAAGGCTTGGGTGATAGGACTTTGCTCATATTTCATTCCCATAATAGTAGGGTTTGTCACCATGAACTCGGTCAGGCCCTTGTTGGTGGAGATCATGGGAGATGACATTTATGGTTTGCCTGTGGTATTCCTATCTCACTGTGGTTGCTCCTTTGCTGTGGTCTCAGCGTTGCTCCATGACCTTAAAATCCTCAACTCTGAAATCGGACGCCTCGCACTCTCTGCAGCTTTTGTCAACGATGTTACAGGTGGAATCTGTGGAGGAATTGGCACTGCTTTTGTGAAGAGCCAGGATTTGGATGATTCTATCCGTACTAGAAACGTGATGGTATTTCTTGTTTTCATAGCCTTGACTCCACTCATTGGTCGTCCTGCAATGAGGTGGATCGTGAGGAAGACCCCAGAAGGTAGACCCGTGAAAAAGATATACATCTATACCATCACAATAGTGTTCTTGGGATTGGGGTATTTTGCTGGGATTTTCCGTGAACCCTTCTTAGTAGCAGCTGTTGTCTTAGGCCTTGCAGTCCCTGAGGGTCCTCCTTTGGGGTCTGAACTGGTTTCCCATATTGAGTTGTTCTCCGAGTGGTTCCTCTCCTCAATTTTTCTCACATGTTGCACCATGAAAGTGGATCTCACCAAATCTGACTCTCTCTCCGTCGTAATAGCCATATCTGCTTTCATCATTTTGGTGCACTTGGTTAGGTGGGTTTTGTGCATCGGAGTTTGCCGATACTGTAAAATGCCCTTCAGTGATGGTTTTTGCCTTGCTCTCATTTTGAGCTGCAAAGGGATTGTGGATATCTGCTCCTATGTTCTTGTCTACGAAACAATGATACAAAGCAAACGAGTAGTAAATGTTATGATCATCTCAGTGTTGTTCCTAGGAACAGCTTCCAGGTTTGGAGTGAAGGCATTGTATGACCCTTCAAGGAAATACGCAGGGTACCAGGAAAGGAACGTCATGAGCTTGAAAAACAACAGTGAGCTTCGGATAGTTGCATGCATCCACAAGCTATGCCACACGATTCACATCAAGAACTTGCTCCAACTTTGTTCCCCTGCACCAGAAAACATACTAGTGGCAGACATTTTACACCTCATGGAGCTAATTGGAAGGTCCAATCCCATTTTCATTGCACACAAACTTCAGCATAGTGTAGGATCATCATCCTACAGCATCTCTGGGGAACTCATTGTGACCTTTGACCTTTTCGAACGTGACTGTGTTGGTTATGCCACTGCTAACACATACACTGCCATATCCCCAGTGATATTCATGCATGAAGATGTTTGCAACCTAGCTTTAGACAAAAATGCAGCCCTTATAGTACTTCCATTTCATGTGAAATGGGGAGGGGATGGTTCGATTGAGTCAGAGGACAGAAACATAAGGGCACTTAATTGCAATGTTTTGGAAAGGGCACCTTGCTCTATTGGAATTCTAGTGAACCGTGGCCCTTCTAGCTTCAACTCAACAACTATCAAAATGGCCATGGTTTTCTTGGGTGGACCTGATGATAGAGAGGCTTTGTGCTTGGCTAATAGGTGTGCCAAAGATGTTAATAATAGTTTGTATGTGTTTAGGTTGTTAGCAGATAACCATGATACCTCCAATTGGGATCACATGATCGATGATGAAGAGTTGAGAAGGGTACGTGGAGCTCATATTAAACAAGATAATGTGATCTATCAAGAGATTACCATAGGAGATGCATCCCAGACAACGTGTTTCATCAAAGATATGGCCAACCAGTTTGATTTTATTGTAGTTGGTAGACGCTATGGAGTTAGATCTCCTCAGACCTTTGGGTTAGAGAATTGGACTGAATATTCAGAGCTGGGGGTCATTGGTGATTTGCTTGCTTCAAATGATACAGATACTACGGCTTCAGTTCTAGTTGTTCAACAACAATTAACTTCTAGGTCATGA 2373 0.4357 MDSNQTLFSSVTLLQDLPSIRHEIYNVCMNQPMKIVSDGIWNPHASAIPSQSAYTMLQLQMVIIFIVTQAIHFILKQFGIPPFVSQVMAGFLMGPSIPTGPLEKYKRMLFPLGSADILSTVSSLGYSFFLFINSVQMDLSLITKTGRKAWVIGLCSYFIPIIVGFVTMNSVRPLLVEIMGDDIYGLPVVFLSHCGCSFAVVSALLHDLKILNSEIGRLALSAAFVNDVTGGICGGIGTAFVKSQDLDDSIRTRNVMVFLVFIALTPLIGRPAMRWIVRKTPEGRPVKKIYIYTITIVFLGLGYFAGIFREPFLVAAVVLGLAVPEGPPLGSELVSHIELFSEWFLSSIFLTCCTMKVDLTKSDSLSVVIAISAFIILVHLVRWVLCIGVCRYCKMPFSDGFCLALILSCKGIVDICSYVLVYETMIQSKRVVNVMIISVLFLGTASRFGVKALYDPSRKYAGYQERNVMSLKNNSELRIVACIHKLCHTIHIKNLLQLCSPAPENILVADILHLMELIGRSNPIFIAHKLQHSVGSSSYSISGELIVTFDLFERDCVGYATANTYTAISPVIFMHEDVCNLALDKNAALIVLPFHVKWGGDGSIESEDRNIRALNCNVLERAPCSIGILVNRGPSSFNSTTIKMAMVFLGGPDDREALCLANRCAKDVNNSLYVFRLLADNHDTSNWDHMIDDEELRRVRGAHIKQDNVIYQEITIGDASQTTCFIKDMANQFDFIVVGRRYGVRSPQTFGLENWTEYSELGVIGDLLASNDTDTTASVLVVQQQLTSRS 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g02283 790 Pfam Sodium/hydrogen exchanger family 63 441 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Spst6g02283 790 PANTHER CATION/H + ANTIPORTER 28 785 - -
Spst6g02283 790 Gene3D - 55 461 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g02283 Spst-Chr6 35837806 35842334 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g02283 27 782 Antiporter Super Family AT3G44900 34.406 1.40e-144 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g02283 K26731 - gmx:100797272 1124