Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst6g02268 | ATGGCTTTCACACTAGACACTAGGTTTGAGGAGAACATGGTTTTCTCTTTTGAGTCTCAGAAGTCAGTGCCAGCACCCTTCCTCACAAAGACCTACCAGCTTGTTGATGACCCTCTCACTGACCACATTGTTTCATGGGGTGAAGATGAAACTACATTTGTTGTGTGGAGACCCCCTGAGTTTTCCACAGATCTTCTTCCCAACTACTTCAAACACAACAACTTCTCAAGCTTTGTTAGGCAACTCAACACCTATGGTTTCAAGAAGGTAGTTGCTGATAGGTGGGAGTTTGCTAATGAGCACTTCAGAAAAGGAGCTAAGCACCTTTTATGTGAAATACACAGGAGGAAAACACCTCAGCAACATCACCAACTCTACCATGACCAACCACCATCCCAGATTCTTCAACAAGATGAAAGTATCTGCTGGCTTGACACTCCACTTCCATCTCCAAAACCAAGCTCAGACATTATAACAGCACTTTCTGAAGACAACCAAAGACTCAGGAGAAAGAACTTCATGCTCCTCTCAGAACTTAGTCACATGAAGAGTTTGTACAATGACATCATATATTTCATCCAAAACCATATAAAACGACCACCCTTTGAGCAAAGAACCAGCAGTGCCATTCCAAAGCTGGTGGAGTTGGACTCGTGGCATGAGTCTCCAAATGACACAGGTCTCAGAACTTCAAAAAGTTATATTGTGGATAATTCTTTGATTACTTGTACTGAAGAATCAAACAGTTCTGTGAAGCTCTTTGGGGTCCCTCTGAGTGCTCTAAGTGGCAGAAAGAGATTGCACCCAGACAACATTAATTGA | 822 | 0.427 | MAFTLDTRFEENMVFSFESQKSVPAPFLTKTYQLVDDPLTDHIVSWGEDETTFVVWRPPEFSTDLLPNYFKHNNFSSFVRQLNTYGFKKVVADRWEFANEHFRKGAKHLLCEIHRRKTPQQHHQLYHDQPPSQILQQDESICWLDTPLPSPKPSSDIITALSEDNQRLRRKNFMLLSELSHMKSLYNDIIYFIQNHIKRPPFEQRTSSAIPKLVELDSWHESPNDTGLRTSKSYIVDNSLITCTEESNSSVKLFGVPLSALSGRKRLHPDNIN | 273 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst6g02268 | 273 | PANTHER | HEAT SHOCK TRANSCRIPTION FACTOR | 21 | 209 | IPR027725 | - | |
Spst6g02268 | 273 | SMART | hsfneu3 | 23 | 116 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 | |
Spst6g02268 | 273 | Pfam | HSF-type DNA-binding | 27 | 116 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 | |
Spst6g02268 | 273 | Gene3D | - | 18 | 118 | IPR036388 | - | |
Spst6g02268 | 273 | SUPERFAMILY | "Winged helix" DNA-binding domain | 24 | 116 | IPR036390 | - | |
Spst6g02268 | 273 | ProSitePatterns | HSF-type DNA-binding domain signature. | 66 | 90 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 | |
Spst6g02268 | 273 | FunFam | Heat stress transcription factor B-4 | 19 | 117 | - | - | |
Spst6g02268 | 273 | PRINTS | Heat shock factor (HSF) domain signature | 65 | 77 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 | |
Spst6g02268 | 273 | PRINTS | Heat shock factor (HSF) domain signature | 78 | 90 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 | |
Spst6g02268 | 273 | PRINTS | Heat shock factor (HSF) domain signature | 27 | 50 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst6g02268 | Spst-Chr6 | 33254647 | 33255986 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst6g02268 | 11 | 268 | HSF | AT1G46264 | 48.052 | 2.31e-85 | 257 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | HSF | Spst6g02268 | HSF_DNA-bind | 4.1e-32 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst6g02268 | K09419 | - | gmx:100806150 | 488.034 |