Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g02253 ATGGTCACGTCACCTCCTTGGAAAAACTCGAAATCCTCCGCCCCCATGGGGCCGGTTCTCGGCCGGCCGATGGAGGACGTGACAGCCACCTACACCATCGGGAAGGAGCTGGGGAGAGGCCAATTTGGTGTCACATACTTGTGCACAGACAAAGAAACAGGTGAACAATTTGCATGCAAAACCATTGCCAAGAGGAAGCTTGTGAACAAGGAGGATATAGAGGATGTGAAAAGAGAGGTGCAACTCATGCAACACCTCTCGGGCCAACCTAACATTGTGGACCTTAAAGGTGCCTATGAGGATAAACAATCGGTGCATTTGGTCATGGAGCTTTGCGCTGGTGGTGAACTTTTTGATCGCATCATTGCTAAGGGCCATTACACTGAACGTGCTGCAGCTTCATTGTTGAGAACCATTGTGCAAATTGTTCATACCTTCCATAACATGGGTGTTATTCACAGAGATCTTAAGCCTGAGAATTTCCTCTTGTTGAATACGGATGAAGATGCACCCCTCAAGGTCACAGATTTTGGTCTATCCGTTTTCTTCAAAGAAGGAGAGACGTTCAGAGACATTGTTGGAAGTGCTTACTACATTGCTCCTGAGGTTTTGAAAAGGAATTATGGGCCAGAAGTTGACATATGGAGTGTTGGTGTCATGTTATACATTCTTCTGAGTGGTGTTCCTCCATTTTGGGCAGAATCCGAACATGGTATATTCAACGCCATCCTAAAAGGCCACATTGATTTTACAAGCGATCCATGGCCTTCAATTTCACCTGCAGCGAAGGATCTTGTAAGCAACATGCTGAATTCAGATCCCCAGAAGAGACTGACCGCATCTGAAGTTCTAGATCATCCATGGATCAAGGAGGATGGAGAAGCTCCTGATAAACCACTTGACAATGCTGTAATGAATAGGCTCAAACAATTCAGAGCAATGAACCAATTCAAGAAAGTTGCTCTAAGGGTCATTGCTGGATGTCTATCAGAAGAAGAAATCATGGGGTTGAAGGAAATGTTCAGGGGCATGGATGCTGACAACAGTGGAACCATCACAATTGAAGAGCTCAAACAAGGGCTTGCACAGCAAGAGACCAAGATTACAGAACAGGAAGCTCAGCAGTTAATGGAAGCTGCTGATGCTGATGGTAATGGAACCATAGATTATGACGAGTTCATAACAGCAACAATGCAGATGAACCGAATGAACAGAGAAGACCATCTTTACACTGCCTTCCAATACTTCGATAAAGATAACAGTGGGTTCATTACCACTGAAGAACTAGAACAAGCTCTCCGTGAGTTCAACATGTATGATGGCAGGGACATGGAGGAAATCCTTCAAGAAGTTGATGGAGATAATTATGAGGAAACTGTCATTATGCAGGATGGCCGAATTAACTATGATGAGTTTGTGGCAATGATGAGAAAAGGAAGTACAGAAGCTGCGACTAAGAAGAGGCGTGATTCAATGCCTTTGCCCTAG 1488 0.4469 MVTSPPWKNSKSSAPMGPVLGRPMEDVTATYTIGKELGRGQFGVTYLCTDKETGEQFACKTIAKRKLVNKEDIEDVKREVQLMQHLSGQPNIVDLKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIVHTFHNMGVIHRDLKPENFLLLNTDEDAPLKVTDFGLSVFFKEGETFRDIVGSAYYIAPEVLKRNYGPEVDIWSVGVMLYILLSGVPPFWAESEHGIFNAILKGHIDFTSDPWPSISPAAKDLVSNMLNSDPQKRLTASEVLDHPWIKEDGEAPDKPLDNAVMNRLKQFRAMNQFKKVALRVIAGCLSEEEIMGLKEMFRGMDADNSGTITIEELKQGLAQQETKITEQEAQQLMEAADADGNGTIDYDEFITATMQMNRMNREDHLYTAFQYFDKDNSGFITTEELEQALREFNMYDGRDMEEILQEVDGDNYEETVIMQDGRINYDEFVAMMRKGSTEAATKKRRDSMPLP 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g02253 495 Pfam Protein kinase domain 31 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g02253 495 ProSiteProfiles EF-hand calcium-binding domain profile. 368 403 IPR002048 GO:0005509
Spst6g02253 495 CDD STKc_CAMK 31 288 - -
Spst6g02253 495 ProSiteProfiles EF-hand calcium-binding domain profile. 404 439 IPR002048 GO:0005509
Spst6g02253 495 FunFam calcium-dependent protein kinase 1 117 296 - -
Spst6g02253 495 ProSitePatterns EF-hand calcium-binding domain. 345 357 IPR018247 -
Spst6g02253 495 Gene3D - 297 482 - -
Spst6g02253 495 CDD EFh 412 477 IPR002048 GO:0005509
Spst6g02253 495 ProSiteProfiles EF-hand calcium-binding domain profile. 332 367 IPR002048 GO:0005509
Spst6g02253 495 MobiDBLite consensus disorder prediction 1 21 - -
Spst6g02253 495 FunFam Calcium-dependent protein kinase 1 297 480 - -
Spst6g02253 495 ProSitePatterns Protein kinases ATP-binding region signature. 37 64 IPR017441 GO:0005524
Spst6g02253 495 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Spst6g02253 495 SUPERFAMILY EF-hand 329 478 IPR011992 -
Spst6g02253 495 Pfam EF-hand domain pair 407 477 IPR002048 GO:0005509
Spst6g02253 495 Pfam EF-hand domain pair 337 397 IPR002048 GO:0005509
Spst6g02253 495 SUPERFAMILY Protein kinase-like (PK-like) 12 317 IPR011009 -
Spst6g02253 495 Coils Coil 354 374 - -
Spst6g02253 495 Gene3D Phosphorylase Kinase; domain 1 32 116 - -
Spst6g02253 495 PANTHER SERINE/THREONINE-PROTEIN KINASE 27 455 - -
Spst6g02253 495 ProSiteProfiles Protein kinase domain profile. 31 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g02253 495 SMART serkin_6 31 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g02253 495 Gene3D Transferase(Phosphotransferase) domain 1 117 296 - -
Spst6g02253 495 SMART efh_1 372 400 IPR002048 GO:0005509
Spst6g02253 495 SMART efh_1 443 479 IPR002048 GO:0005509
Spst6g02253 495 SMART efh_1 336 364 IPR002048 GO:0005509
Spst6g02253 495 SMART efh_1 408 436 IPR002048 GO:0005509
Spst6g02253 495 ProSitePatterns EF-hand calcium-binding domain. 417 429 IPR018247 -
Spst6g02253 495 FunFam Calcium-dependent protein kinase 1 33 116 - -
Spst6g02253 495 ProSitePatterns EF-hand calcium-binding domain. 381 393 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g02253 Spst-Chr6 31949039 31955634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g02253 4 490 EF-hand Containing Proteins AT5G12180 79.877 0.0 830
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Spst6g02253 Pkinase 1.3e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g02253 K13412 - gmx:100781355 868.611