Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g02228 ATGATTTCTTCCTTGAGACAGCCTGTTGTGGGGATCAGTGGTTCTGATCTTCTTATGAGGCAAAGACATGCAACCCCAGTTAAGGCAAGGTCGTTTTTACCTTCTTTATCGAGAGAACAGGGTCAGGGATCTCTGGTTTCAGTGCATAAGCCACTGCACATTGCTTCTTCCCTTGGAAGTGGAAATTTTGTGTCAGTGAAGAGTGATGGAAGAAGGGGTGATTTGGGGAGGTGTGAGGCCTATGAGGCAGATAGATCAGAGGTTGAGGCTACAAACACACCATCAGAGGCTGCAAAAAAGGTGAAAATTGGGATATATTTTGCAACCTGGTGGGCTCTGAATGTGGTGTTCAATATTTATAACAAGAAGGTGTTGAATGCCTACCCGTACCCTTGGCTGACTTCAACTCTCTCACTTGCATGTGGGTCTCTTATGATGTTGATCTCTTGGGCCACTGGGATTGCAGAAGCCCCGAAGACTGATCCTGAATTTTGGAAGACTTTGTTCCCTGTTGCTGTTGCACATACAATAGGGCATGTAGCGGCAACTGTTAGTATGTCAAAAGTTGCAGTATCATTTACACATATTATCAAGAGTGGTGAGCCTGCTTTTAGTGTTCTGGTTTCAAGATTTCTCTTGGGTGAGACCTTCCCTGTGCCAGTCTATCTGTCTTTACTTCCGATCATTGGTGGATGTGCACTTGCAGCTGTGACTGAACTCAATTTCAACATGACTGGTTTTATGGGGGCTATGATATCAAACTTGGCATTTGTATTCCGTAATATCTTTTCGAAAAAGGGCATGAAGGGAAAGTCTGTCAGTGGAATGAATTACTATGCTTGTTTATCTATTTTGTCCCTTGCAATTCTCACACCCTTCGCAATTGCTGTTGAAGGGCCACAGATGTGGATTGCCGGATGGCAAACAGCCGTCTCTCAGATCGGAAACCAACTCATATGGTGGGTTGCAGCTCAAAGTGTATTCTATCATCTATACAATCAAGTGTCATACATGTCTCTGGATGAGATCTCTCCATTGACGTTTAGCATTGGAAACACCATGAAACGTATATCTGTCATCGTGTCTTCAATTATTATCTTCCACACACCAGTTCAACCTGTCAATGCTCTTGGTGCTGCTATTGCCATCCTTGGAACCTTCTTATATTCACAGAGGGTGAAGTTGGTTATGAATGTACCTTGTGTTTTATCTTCCAATCTAATGGATGGTATTCTGAAGTTAGGTGATCCAGTGTTTTATTGCTTACCTTGTAGACTTTCCAAAGCTGACCACACCAAATACTTTAGCATATGCCTTATTGTTCATAACATCACAATGAAGCTTCTAATGAAAGCATCTGAAGGTAGAAGGCAAAACAATAGATTTGGGGAACTAAAATTCCTTGAAGGACTTGTTTGTTGCTGTTCTTCATGCTCAACCAGGGACAAGAAAATTGATTTTGGAATGTGTCACTGCTGGATTTTTGCAAGACTAGGATGA 1500 0.4233 MISSLRQPVVGISGSDLLMRQRHATPVKARSFLPSLSREQGQGSLVSVHKPLHIASSLGSGNFVSVKSDGRRGDLGRCEAYEADRSEVEATNTPSEAAKKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATGIAEAPKTDPEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPVPVYLSLLPIIGGCALAAVTELNFNMTGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLAILTPFAIAVEGPQMWIAGWQTAVSQIGNQLIWWVAAQSVFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFLYSQRVKLVMNVPCVLSSNLMDGILKLGDPVFYCLPCRLSKADHTKYFSICLIVHNITMKLLMKASEGRRQNNRFGELKFLEGLVCCCSSCSTRDKKIDFGMCHCWIFARLG 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g02228 499 Pfam Triose-phosphate Transporter family 102 390 IPR004853 -
Spst6g02228 499 SUPERFAMILY Multidrug resistance efflux transporter EmrE 145 237 - -
Spst6g02228 499 PANTHER SOLUTE CARRIER FAMILY 35 102 391 - -
Spst6g02228 499 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 102 392 IPR004696 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g02228 Spst-Chr6 30869891 30873662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g02228 37 391 Antiporters AT5G54800 80.387 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g02228 K15283 - gmx:100801832 719.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g02228 6 30869891 30873662 Spst8g00841 8 7544694 7551679 PCT