Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g02215 ATGATTAGTATATCCAACCTCGGTTTGCTTCTCGTAGTGTCCTTCCAAATCAAGAAACTCCCAAGGGTCGTTTATGGTTATCAGATAGTGACCAAGTCGGGCGTTCAGGTCACACACCCACTATTTTTGTTTACGAAGCAAAATACAACTGACACCGTTGAGAGATTGAGGAACTCACTTGGTGAGATTTTAGTGCACTACTATCTAGTAGCTGGCAGATTGAGCTTAGCGGAAAGTGGTCGAATTGAAGTAGATTGCAATGCAAAGGGAGTGAGATTGTTTGAAGCTCAAACCACAACATCATTTGCTAATTATGACTTTTCACCTTCTGAGTCTGTCAAGGAACTTGTTCCAAAAATTGATTACACTCAATCCATAGAAGAAATTCCTTTGTTGTTTGTGAAATTGACAAGATTCCATGGTGGTCAAGGATTTTTTTATTGGCGTGGCTTTCAGTCACCCTTTGTCTTATGCGCTTGGTTACTTTCAATTCATGAATTCATGGGCAAAGCTGGGTCGAGGAGAGACACTAGAGCCACATGA 543 0.4107 MISISNLGLLLVVSFQIKKLPRVVYGYQIVTKSGVQVTHPLFLFTKQNTTDTVERLRNSLGEILVHYYLVAGRLSLAESGRIEVDCNAKGVRLFEAQTTTSFANYDFSPSESVKELVPKIDYTQSIEEIPLLFVKLTRFHGGQGFFYWRGFQSPFVLCAWLLSIHEFMGKAGSRRDTRAT 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g02215 180 Gene3D - 29 149 IPR023213 -
Spst6g02215 180 Pfam Transferase family 39 146 - -
Spst6g02215 180 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 39 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g02215 Spst-Chr6 30538591 30539357 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g02215 56 142 Monolignol Biosynthesis Gene Families AT5G48930 36.364 6.30e-16 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g02215 K13065 - gmx:102663900 138.658