Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g02211 ATGGTAACCATTGTGGCTTCTCATAATGTCACTCCAAACCAACCAACTCCCACTGATCCTTTATGGCTATCAGATAGTGACCAAATCGGGTTCCTAGCTCACGTACCAAATATCTACATCTACAAAGCAAAACACCACGGCAATCTCATTGAGAGGATGAAGAACTCTCTTAGCAAGACTTTAGTTCACTACTATCCAGCAGCTGGCAGATTGAGATTGACAAAAGGGGATCGAATGGAAGTGGATTGCAATGCAAAGGGAGTCACATTACTTGAAGCCGAAAGCTCAAAGACATTTGGTGAATATGGAGACTTTTCACCTTCGGATTCAACAGAGGAACTTGTTCCCAAAGTTGATTACACTCAACCTATAGAGGAGATTCCACTACTGCTACTTCAGTTAACAAGGTTCCATGGTGGTGAAGGACTTGCCCTTGGAGTTGTTATCTCTCACCCTTTGACCGATGCGACCGGCATAATGCGCTTAATAAACCATTGGGCAAAGGTGAATCGAGGAGAAGAACTAGAACCTACTGAAATTCCATTTCTAGATCGATCAGGGTTCAAAATACCACCGCAACATTCATCACCAAGTGTTAAACTCCCAGAGTGGAAGCCTGTGCCACAAACAGCACAAACAGAGAAGAAGGAGAGAAGTGCTTCGTTGTTGAAACTCACATCAAGCCAGGTGGAGAGGCTAAAGAAGAAAGCTAATGAAAAACCTTCAAAAGAAGGGGCAAGACCTTACAGCAGATTTGAAGTTGTTGCTGCTCATATATGGAGATGTGCAGCCAAGGCTCGTGAATCTGGTGAGAACCACCCAACTTTTGTTCGGTTTAGTGTTAATATTCGCAGTAGATTGAATCCACCTCTTCCTCAGAACTATTTTGGGAATGCTTTGGCCAAAGGAGTGACACCAAAATGTTATGAGAGCGATATCATAGCAAACCCTTTAGGTTTTGCTGCTGGAAAGATAAGGGAAGCAGCTCATGCGGTTACGGATGAGTTCATAAGGTCACAATTAAAGGCTAGTTTAGGGCAAGGGCAACAGGATCACATAAGGGCCTTTTTCAAGGGACAAGGACACCTTATGAATATCCCTTATGCTGGAAATCATAACATTCTGCTAACAAGCTTGACCACCATGCCAGTGTATGAAGCAGACTTTGGTTGGGGAAAGCCTATTTATTTTGGTTTACCAAGAGTCACTCAAGAAGATAGAGCATCAATTGTTCGAAGCCCAGATGGGGATGGTGTCGTAGTCACCATATTCTTCCAGACAGCACTTATGCAGCTTTATAAAAAATTCTTCTACGAGGATTTGTTTGTCTCATCGTTATAA 1341 0.4295 MVTIVASHNVTPNQPTPTDPLWLSDSDQIGFLAHVPNIYIYKAKHHGNLIERMKNSLSKTLVHYYPAAGRLRLTKGDRMEVDCNAKGVTLLEAESSKTFGEYGDFSPSDSTEELVPKVDYTQPIEEIPLLLLQLTRFHGGEGLALGVVISHPLTDATGIMRLINHWAKVNRGEELEPTEIPFLDRSGFKIPPQHSSPSVKLPEWKPVPQTAQTEKKERSASLLKLTSSQVERLKKKANEKPSKEGARPYSRFEVVAAHIWRCAAKARESGENHPTFVRFSVNIRSRLNPPLPQNYFGNALAKGVTPKCYESDIIANPLGFAAGKIREAAHAVTDEFIRSQLKASLGQGQQDHIRAFFKGQGHLMNIPYAGNHNILLTSLTTMPVYEADFGWGKPIYFGLPRVTQEDRASIVRSPDGDGVVVTIFFQTALMQLYKKFFYEDLFVSSL 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g02211 446 MobiDBLite consensus disorder prediction 193 221 - -
Spst6g02211 446 Gene3D - 208 440 IPR023213 -
Spst6g02211 446 Gene3D - 1 206 IPR023213 -
Spst6g02211 446 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 430 - -
Spst6g02211 446 Pfam Transferase family 1 438 - -
Spst6g02211 446 Coils Coil 443 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g02211 Spst-Chr6 30412998 30414338 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g02211 2 439 Monolignol Biosynthesis Gene Families AT5G48930 33.853 9.22e-78 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g02211 K13065 - gmx:100802888 639.032