Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g02203 ATGTCAAAATCTATACCTAAAACGGGTTCGCAGAAAAATGTTCGTATTGGTTCGCGTAATCATACTCGTAAAATACCAAAGGGAATTATTCATGTTCAAGCTAGTTTCAACAATACTATTGTGACTATTACAGATGTACGAGGTCGGGTGATTTCTTGGTCCTCTGCTGGTACTTGTGGATTCAAGGGTACACGAAGGGGAACACCTTTTGCGGCTCAAACTGCAGCAGGAAATGCTATTCGAACAGTATCGGATCAAGGCATACAACGAGCAGAAATCATGATAAAAGGGCCTGGTCTTGGAAGAGATGCAGCATTAAGAGCTATTCGTAGAAGTGGTATACTATTAAATTTTATACGAGACGTAACTCCTATGCCACATAATGGATGTAGGTCTCCTAAAAAAAGACGTGTATAA 417 0.4005 MSKSIPKTGSQKNVRIGSRNHTRKIPKGIIHVQASFNNTIVTITDVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRTVSDQGIQRAEIMIKGPGLGRDAALRAIRRSGILLNFIRDVTPMPHNGCRSPKKRRV 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g02203 138 PIRSF RPS11p_RPS11a_RPS14e_RPS11o 6 138 IPR001971 GO:0003735|GO:0005840|GO:0006412
Spst6g02203 138 Pfam Ribosomal protein S11 28 137 IPR001971 GO:0003735|GO:0005840|GO:0006412
Spst6g02203 138 ProSitePatterns Ribosomal protein S11 signature. 106 128 IPR018102 -
Spst6g02203 138 Gene3D Ribosomal protein S11 8 138 IPR036967 GO:0003735|GO:0005840|GO:0006412
Spst6g02203 138 NCBIfam 30S ribosomal protein S11 21 135 IPR019981 GO:0003735|GO:0005840|GO:0006412
Spst6g02203 138 SUPERFAMILY Translational machinery components 23 138 - -
Spst6g02203 138 Hamap 30S ribosomal protein S11 [rpsK]. 7 138 IPR001971 GO:0003735|GO:0005840|GO:0006412
Spst6g02203 138 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 20 136 IPR001971 GO:0003735|GO:0005840|GO:0006412
Spst6g02203 138 FunFam 30S ribosomal protein S11, chloroplastic 11 138 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g02203 1 128 Cytoplasmic Ribosomal Protein Gene Family AT3G52580 33.577 1.71e-15 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g02203 K02948 - gmx:3989330 262.692