Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g02195 ATGAACAAGATATATGGTTTTGAGGGTGAGGTGCGCTCAAAGTTGAATGATACATTTGTCGAACTATTTGCAGAAGTATTTTGCTGTTTACCTTTGGCTCATGTGATAAATGAGAAAGTTTTCGTAGTTCATGGAGGTCTTTTTAGTGTTGACGGTGTCAAACTCTCTGACATTCGATCAATTAATCGATTTTGTGAACCTCCTGAAGAAGGGTTGATGTGTGAATTGCTCTGGAGTGATCCACAACCTCTCCCCGGAAGGGGCCCAAGCAAGCGTGGTGTGGGCCTTGCTTTTGGAGCAGATGTTACAAATAGGTTTTTGAAGGAAAATAATTTAGATTTAGTTGTGAGATCTCATGAAGTAAAGGATGAGGGTTACGAGATTGAACATGATGGTAAACTCATAACTGTGTTTTCTGCTCCAAATTACTGTGACCAGATGGGTAACAAAGGTGCCTTTATTCGATTTGAAGCACCAGATTTGAAACCCAACATTGTCACATTCTCGGCAGTGCCACACCCTGATGTCAAACCAATGGCTTATGCAAACAACTTCCTCAGGATGTTCTCATGA 573 0.4119 MNKIYGFEGEVRSKLNDTFVELFAEVFCCLPLAHVINEKVFVVHGGLFSVDGVKLSDIRSINRFCEPPEEGLMCELLWSDPQPLPGRGPSKRGVGLAFGADVTNRFLKENNLDLVVRSHEVKDEGYEIEHDGKLITVFSAPNYCDQMGNKGAFIRFEAPDLKPNIVTFSAVPHPDVKPMAYANNFLRMFS 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g02195 190 SMART pp2a_7 1 172 IPR006186 GO:0016787
Spst6g02195 190 Pfam Calcineurin-like phosphoesterase 23 122 IPR004843 GO:0016787
Spst6g02195 190 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 1 183 - -
Spst6g02195 190 SUPERFAMILY Metallo-dependent phosphatases 1 184 IPR029052 -
Spst6g02195 190 PRINTS Serine/threonine phosphatase family signature 133 149 IPR006186 GO:0016787
Spst6g02195 190 PRINTS Serine/threonine phosphatase family signature 25 51 IPR006186 GO:0016787
Spst6g02195 190 PRINTS Serine/threonine phosphatase family signature 111 131 IPR006186 GO:0016787
Spst6g02195 190 PRINTS Serine/threonine phosphatase family signature 55 82 IPR006186 GO:0016787
Spst6g02195 190 Gene3D - 1 189 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g02195 Spst-Chr6 30036662 30038127 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g02195 2 115 Calmodulin-binding Proteins AT5G63870 31.757 5.51e-13 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g02195 K04460 - gmx:100806083 387.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g02195 6 30036662 30038127 Spst6g02195 6 30036662 30038127 ECH