Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g02182 ATGGACTTTTTCTCTGAATATGGTGATGCCAACCAGTACAAGATTCAAGAAGTCATTGGGAAGGGTAGTTATGGTGTTGTCTGTTCAGCCATTGACACTCACACTGGTGAAAAAGTGGCTATTAAGAAGATTCATGACATCTTCGAGCATATATCTGACGCTGATCGAATTCTCCGTGAGATAAAGCTGCTCAGACTTCTTCGACATCCTGATATTGTAGAAATAAAACACATTATACTGCCCCCATCAAAGAAGGGCTTTAAAGATATTTATGTTGTTTTTGAGCTCATGGAGTCTGATCTTCATCAAGTCATCAAAGCCAATGATGACTTGACAAAAGAACACTATCAATTTTTTCTTTATCAATTACTTCGAGCACTAAAGTACATTCATAGTGCCAATGTCTATCATCGAGATTTGAAGCCAAAAAATATCCTGGCAAATGCAAACTGTAAGCTAAAAATATGTGATTTTGGGCTAGCTAGAGTTGCCTTCAGTGACACACCAACAACCATATTTTGGACGGATTATGTTGCTACAAGGTGGTATAGAGCTCCAGAGCTATGTGGATCATTTTACTCAAAGTATACACCAGCAATTGATATATGGAGTATAGGTTGCATCTTTGCTGAAGTACTAATGGGAAAGCCACTTTTTCCTGGGAAAAATGTAGTCCACCAATTGGACCTGATGACAGATCTGCTTGGGACACCATCAATGGATACTATATCACGGGTACGTAATGAAAAAGCAAGAAGATACCTAACTAGCATGAGGAAAAAGCAGCCTGTGCTATTTTCTCAAAAGTTTCCCAATGCAGACCCTTTAGCACTAAGGTTACTGGAAAGATTGTTGGCGTTTGATCCGAAAGACCGGCCTACTGCTGAAGAGGCATTGGCTGATCCTTACTTCAAGGGGCTGGCAAAAGTTGAAAGAGAGCCATCTTGCCAGCCTATAACAAAAATGGAATTTGAATTTGAAAGACGAAGAATCACTAAGGAAGAAATTCGAGAACTGATTTTCCATGAGATTCTAGAGTATCATCCTCAACTATTGGAAGACTATATGAATGGAACAAGAACTAATTTTCTTTATCCAAGTGCTGTTGATCAATTTAAAAAGCAGTTTGCACATCTAGAGGAAAGTGGTAAAAATGGTCCTGTTATGCCACTTGATAGAAAGCATGTTTCTCTTCCAAGGCCAACAGTTGTACATTCAAATACAACACACCCAAAAGATCAAACAAACATTGCTGCTTGCAAAAACCGACCAACCACTGAGGAATACAACAGGAATTCCAGAGATACAAAAATTTTAGTGCCAAGGTCAATGCAGGGATCACAAAGAATTCCCCAAGCAAAACCTGGTAAAGTTGCGGGGCCTGTTGCACACGAGTATGACAACATTGTGAAGGGTTCTTCTGATCCCAGGTCGTTTATTAGAGGTTCTTTGCTTCCTACTCAAGCTGTTCCCCCAGCATACTATTATCATCAAAGATCCAGCACTGGAAACCAAGAAAGGTTAGCAACAGAAGCTGACAAGAGTGTGCTGCAAGCAAAACATGCACAACAACACTGTGGAGTTAATGCCAAGAGGGAACCAGATATAGCTATTAATATTGATACAAATCCCTTTTTTATGACAAGGGCAGGAGTTAACAAGTTAGAGCAAGGTGATCAAATAGTCATTGATACAAACTTGTTGCAGCCAGAGGCATATGGTGGAATCAGTGCTGCAGCTGGGGCCACTGCACATAGAAAGGTTGGTCCTGTTCAGTATGGTATGACAAGAAAGTTGTAG 1800 0.4017 MDFFSEYGDANQYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDADRILREIKLLRLLRHPDIVEIKHIILPPSKKGFKDIYVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHSANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTIFWTDYVATRWYRAPELCGSFYSKYTPAIDIWSIGCIFAEVLMGKPLFPGKNVVHQLDLMTDLLGTPSMDTISRVRNEKARRYLTSMRKKQPVLFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKVEREPSCQPITKMEFEFERRRITKEEIRELIFHEILEYHPQLLEDYMNGTRTNFLYPSAVDQFKKQFAHLEESGKNGPVMPLDRKHVSLPRPTVVHSNTTHPKDQTNIAACKNRPTTEEYNRNSRDTKILVPRSMQGSQRIPQAKPGKVAGPVAHEYDNIVKGSSDPRSFIRGSLLPTQAVPPAYYYHQRSSTGNQERLATEADKSVLQAKHAQQHCGVNAKREPDIAINIDTNPFFMTRAGVNKLEQGDQIVIDTNLLQPEAYGGISAAAGATAHRKVGPVQYGMTRKL 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g02182 599 ProSitePatterns MAP kinase signature. 48 151 IPR003527 GO:0004707|GO:0005524|GO:0006468
Spst6g02182 599 SMART serkin_6 13 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g02182 599 ProSiteProfiles Protein kinase domain profile. 13 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g02182 599 FunFam Mitogen-activated protein kinase 99 327 - -
Spst6g02182 599 SUPERFAMILY Protein kinase-like (PK-like) 10 308 IPR011009 -
Spst6g02182 599 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 13 355 - -
Spst6g02182 599 FunFam Mitogen-activated protein kinase 4 106 - -
Spst6g02182 599 Gene3D Transferase(Phosphotransferase) domain 1 99 327 - -
Spst6g02182 599 ProSitePatterns Protein kinases ATP-binding region signature. 19 43 IPR017441 GO:0005524
Spst6g02182 599 Pfam Protein kinase domain 13 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g02182 599 Gene3D Phosphorylase Kinase; domain 1 28 350 - -
Spst6g02182 599 CDD STKc_TDY_MAPK 12 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g02182 Spst-Chr6 29534281 29539081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g02182 1 436 MAP Kinase Gene Family AT2G42880 83.002 0.0 755
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Spst6g02182 Pkinase 5e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g02182 - - gmx:100815293 1057.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g02182 6 29534281 29539081 Spst8g00815 8 7367468 7381448 PCT