Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g02179 ATGGTGTCCTCCATGGAACTCCTAAGGCTTCCAAGTTGGCTCATGAACCAAGTGCTTGTTAAATCATGTTATGGAGTAGCAAGGAAAATTAAAAACCATGGTTTTCATTGGGGTGAACTTTCATCTGAACCAGTGGAACAACCTTCCTCATTCCCTAATATTGTCAATTGTGATTTGGAGGGTAGAGGGTCACAAACCCTTGCTTGTGACTTCCACAAAGTCCTCTTAAGAACTCATTCCTTCTTTCCCTATTTCATGTTGGTTGCCTTTGAAGGTGGAAGCATTTTCAGGGCTTTTCTCTTGCTTTGTTCATGTCCTATGCTGTGGATTATGAACTATGAAATGAAGCTCAGACTCATGATCTTCATCTCCTTTTGTGGACTCAGAGTGAAGGACATGGAGAACACTTCAAGGGCAGTTTTGCCCAAGTTTTACTTGGAGAACCTCAACCTTGAGGCCTGTGGGGTAGCGGCTTCAGCAGGGTCCAGGGTTTTCTTCACCACAATGCCTAGAGTGATGGTGGAAGGGTTTCTGAAGGAGTATTTGAATGCTGATGCTGTTTTAGCCACCGAGTTGCACACTGCTGGCTGTTACTTCACTGGTTTGCTCTCTAAATCTGGTTTGCTTGTGAAGCATGCTGCTCTCATGGATTATTTTGGAGATACAAAGCCTGACCTTGGTATTGGTAACACAAGTCTTCATGATCAACTTTTTATTTCTCGTTGCAAGGAGGCATATGTGGTGATGAATGAGAATGGAAAAGTGATGCCAAGGAGCAAATATCCAAAGCCCTTAATATTTCATGATGGAAGACTAGCATTCTTGCCTACTCCTTCAGCAACCCTCTTTATGTTCATGTGGCTTCCAATTGGATTTTTGATGGCCCTTTACAGAATCTTTCTGGGTGTGTTCCTTTGTTGTAAATTCACGATGGCATTAGGAGTGTGGAGTGGCATGAATCTGAATTTCAAGGACAATAACCGACAAAGATCAGAGACAAATAAAGGGGTGCTTTATGTTTGCACTCACAGAACTCTCTTGGATCCAATTTTTCTCAGCACATTTTTGGGGAGGCCTCTGACTGCAGTCACATACAGCTTAAGCAAGGTGTCTGAATTGATAGCCCCTATTAGGACCATAAGACTCACAAGGGACAGAGAACAGGATGGGGAAACTATGAAGAGGTTGCTTAGTGAAGGGGATTTGGTGGTGTTCCCTGAAGGAACAACTTGTAGGGAGCCCTATCTGTTAAGGTTCAGTTCCTTGTTTGCAGAACTAGCTGATGAGATTGTGCCTGTGGCTATGAATGCTGAAGTGAGCATGTTCTATGGGACCACAGCAAGTGGGCTAAAGGTGTTGGATCCAATTTTCTTTTTCATGAACCCTAAGCCTAGATATGAGATTGAGATCCTTGCAAAGGTTCCTAAGGAGCTCACATGTGCTGGTGGAAGGTCAAGTCATGAAGTAGCAAATTACATACAGAAACAGTTGGCTTATGCTTTGGGATTTGAGTGCACCAACCTTACACGGAGGGATAAATATATGATGCTGGCTGGAAATGAAGGGGTTGTTCAAGAAAAGAAGGGGAGAAGATTCTGCTAA 1602 0.4332 MVSSMELLRLPSWLMNQVLVKSCYGVARKIKNHGFHWGELSSEPVEQPSSFPNIVNCDLEGRGSQTLACDFHKVLLRTHSFFPYFMLVAFEGGSIFRAFLLLCSCPMLWIMNYEMKLRLMIFISFCGLRVKDMENTSRAVLPKFYLENLNLEACGVAASAGSRVFFTTMPRVMVEGFLKEYLNADAVLATELHTAGCYFTGLLSKSGLLVKHAALMDYFGDTKPDLGIGNTSLHDQLFISRCKEAYVVMNENGKVMPRSKYPKPLIFHDGRLAFLPTPSATLFMFMWLPIGFLMALYRIFLGVFLCCKFTMALGVWSGMNLNFKDNNRQRSETNKGVLYVCTHRTLLDPIFLSTFLGRPLTAVTYSLSKVSELIAPIRTIRLTRDREQDGETMKRLLSEGDLVVFPEGTTCREPYLLRFSSLFAELADEIVPVAMNAEVSMFYGTTASGLKVLDPIFFFMNPKPRYEIEILAKVPKELTCAGGRSSHEVANYIQKQLAYALGFECTNLTRRDKYMMLAGNEGVVQEKKGRRFC 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g02179 533 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 261 525 - -
Spst6g02179 533 PANTHER ANCIENT UBIQUITOUS PROTEIN 65 528 - -
Spst6g02179 533 CDD LPLAT 327 498 - -
Spst6g02179 533 Pfam Acyltransferase 326 430 IPR002123 GO:0016746
Spst6g02179 533 SMART plsc_2 337 438 IPR002123 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g02179 Spst-Chr6 29480281 29482666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g02179 1 525 Acyl Lipid Metabolism Gene Families AT1G06520 55.043 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g02179 K13508 - gmx:100802208 964.526
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g02179 6 29480281 29482666 Spst8g00900 8 7956262 7959116 PCT