Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g02155 ATGGAGAACAATGGGCAAGATGAAAACCACCCGAAAGGCGACACCTTTACTGTCCCTTACCTCATCAACTCTAGTGGGATCTCCCCAACGCTGGCCAGGGAACTCTCCAACAAGGTCAATTTGAAAACCCCAGATGGCCCTGATGCTGTTATGGGTGTTCTCAACAACTACGGGTTCTCCAAAATCCAGGTTGCAAAACTTGTGGAGAAACACCCCTTGGTGCTTGTTGCTAAGGCAGAGAACACCCTGTTGCCTAAACTCGAGTTCTTACGTTCTATTGGAGTGTCCAACACTGACATGCCTAAGATCCTAATTGCTAACTACACCATCTTGTTAAGAAGCTTGGAAAAATTCCTCATTCCTCGTTTTGAGATCCTCCGGTGTGTACTTCGTGGTGATGGTGAAGTTGTTAGAGCATTGAAAAATACCCCATTTGGTTTTACATGTGGTGACACAGTGAATGATTTGGTTCCAAACATTGAGCTTTTGAAGCAATGTGGTGTGCCCCAAGCTTCTGTCTCTTACCTGATGATGCATGCTGGCGTTCTAGCCTACTGGGAGCATTCCAAATTTGTGGAAACTGTCAACACTGCTAAGGAATTTGGGTTTAATCCTTTGAGATTAAATTTCATTGTGGGTATTGAAATGCTTTTGACTAAGAGCAAAGCAACGTGGGAATCAAGGTTTGAGATTTATGAGAGGTGGGGATGGGACCGGGAAATTGCTCTTCAAGCATTTCGAAAGTTTCCCGGTGTTGTGAAGTTGTCAGAGGAGACGTTTACCAAGAAAATGAGTTTCCTAGTCAAGGAGATGGGTTATTCTTCAAAAGGTATTGCTGAATATCCTCTGGTTTTAGTGTACAACTTGGAGAAGAGGATTATCCCTAGATTCTCGGTCATCAAAATCTTGAAATCAAAAGGTCTTGTCGAGAAGAATGTACAGTTTAGTCTCATTGTTTGCATAACTGAAGAAATTTTTTTGGAGAGGTTCGCCGTCAATTTTCAGAAAGTTTTGCCTCAGTTGGCACATGTCTACAACAGTTTTATCGACAAACAGACTGTCATATAG 1068 0.426 MENNGQDENHPKGDTFTVPYLINSSGISPTLARELSNKVNLKTPDGPDAVMGVLNNYGFSKIQVAKLVEKHPLVLVAKAENTLLPKLEFLRSIGVSNTDMPKILIANYTILLRSLEKFLIPRFEILRCVLRGDGEVVRALKNTPFGFTCGDTVNDLVPNIELLKQCGVPQASVSYLMMHAGVLAYWEHSKFVETVNTAKEFGFNPLRLNFIVGIEMLLTKSKATWESRFEIYERWGWDREIALQAFRKFPGVVKLSEETFTKKMSFLVKEMGYSSKGIAEYPLVLVYNLEKRIIPRFSVIKILKSKGLVEKNVQFSLIVCITEEIFLERFAVNFQKVLPQLAHVYNSFIDKQTVI 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g02155 355 PANTHER CGI-12 PROTEIN-RELATED 15 331 IPR003690 GO:0003690|GO:0006355
Spst6g02155 355 SMART mt_12 275 309 IPR003690 GO:0003690|GO:0006355
Spst6g02155 355 SMART mt_12 101 133 IPR003690 GO:0003690|GO:0006355
Spst6g02155 355 SMART mt_12 243 274 IPR003690 GO:0003690|GO:0006355
Spst6g02155 355 SMART mt_12 65 96 IPR003690 GO:0003690|GO:0006355
Spst6g02155 355 SMART mt_12 137 169 IPR003690 GO:0003690|GO:0006355
Spst6g02155 355 FunFam Mitochondrial transcription termination factor-like 115 338 - -
Spst6g02155 355 Pfam mTERF 218 320 IPR003690 GO:0003690|GO:0006355
Spst6g02155 355 Pfam mTERF 52 257 IPR003690 GO:0003690|GO:0006355
Spst6g02155 355 Gene3D Transcription termination factor 3, mitochondrial 133 338 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g02155 Spst-Chr6 28656497 28662258 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Spst6g02155 mTERF 9.5e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g02155 K15031 - gmx:100777030 501.13