Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g02151 ATGAATTCTAAGGTACAAGGCTCTGATGATACCAAGAAGGGTGAAGAAGTTGTGCTTCCTGGCTTTAGATTCCACCCCACAGATGAAGAACTTGTTGGGTTTTATCTGCAGAGAAAAGTGGAAAAGAAGCCTCTGAAAATTGAACTCATCAAACAGGTTGATATCTACAAATATGATCCATGGGATCTTCCAAGTAAGATCTGCTTCCCCTACAAAGGGAGGAAGTACAGGAACAGCGTGAGACCAAACAGGGTAACCAGGTCAGGGTTCTGGAAAGCCACAGGAATAGACAAGTCCATATACTGCGTGAAGGAACCCCATGAATGCATTGGTCTGAAGAAGTCATTGGTTTATTACCGTGGAAGCGCTGGAAAAGGCACCAAAACTGACTGGATGATGCATGAGTTTCGTCTTCCACCCAATTCAAAATCCTCCACCAACATTGCTAATGCTACCAATAATGATCTTCATGAAGCTATGGAAACAATTGACCTCCACATCGGTGGTCAAATAGCAAAAGAGGTGTGGACACTCTGCAGGATATTCAAACGCACCCCATCATTCAAAAAGTACACTCCAAATTTGAAAGACTCAACACCCCTCACCAAACCCAACCCTGTGAATTCCAACACAAGCACCTCAGATTCTGACATTTGCAAGCCATATTTCATCTGCAGAGACCCTGTGATGATGCAGCAGCTAGAAAGAAAACCAGTATTTGGACAGGTTGACGAAAAGAAACACTTCTTTCTAGGCCAGTTTGGCCAACTACCCCATCTTCAACCCCCATCAACCCCTTACCCAAGTTTTTTGAACCAGAATGTTGAGGACTATGCATTTGCCAATGAGAATTGGGATGACCTAAGATCTGTGGTTCAGTTTGCCATTGATCCTTCCTCAGTGTTTGATTGTACAGAAACATATATTCCACCCTTCTTTTCTTAG 945 0.4328 MNSKVQGSDDTKKGEEVVLPGFRFHPTDEELVGFYLQRKVEKKPLKIELIKQVDIYKYDPWDLPSKICFPYKGRKYRNSVRPNRVTRSGFWKATGIDKSIYCVKEPHECIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPPNSKSSTNIANATNNDLHEAMETIDLHIGGQIAKEVWTLCRIFKRTPSFKKYTPNLKDSTPLTKPNPVNSNTSTSDSDICKPYFICRDPVMMQQLERKPVFGQVDEKKHFFLGQFGQLPHLQPPSTPYPSFLNQNVEDYAFANENWDDLRSVVQFAIDPSSVFDCTETYIPPFFS 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g02151 314 Pfam No apical meristem (NAM) protein 20 138 IPR003441 GO:0003677|GO:0006355
Spst6g02151 314 ProSiteProfiles NAC domain profile. 18 184 IPR003441 GO:0003677|GO:0006355
Spst6g02151 314 MobiDBLite consensus disorder prediction 193 215 - -
Spst6g02151 314 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 219 - -
Spst6g02151 314 SUPERFAMILY NAC domain 15 183 IPR036093 GO:0003677|GO:0006355
Spst6g02151 314 Gene3D NAC domain 27 188 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g02151 Spst-Chr6 28116131 28120888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g02151 8 185 NAC Transcription Factor Family AT5G39820 54.545 1.45e-60 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Spst6g02151 NAM 2.1e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g02151 - - gmx:100819795 511.531