Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g02148 ATGGTAACCATCAAAGCATCTTACACCATACTTCCAAAGAAACCTACTCCAGGTGGCTTTCTATGGCTGTCTGATATTGATCAAGTTGCGCGTCTGTATCACCCACGTACCATTTACGTTTTTGATGCAAAGCACAACCATGATACATTAATTAAACAGATGAGAAACTCTCTTAGCAAGATTTTGTGCCACTACTATCCGTTAGCTGGTAGATTGAGAAGGATAGAAGAAGGTGGAAGATTGGAATTGAATTGCAATGCAAAAGGGGTGCTGTTGATTGAAGCAGAATCCACAAAATCATTGCATGATTATGGCGACTTTTTGGGCGAGTCCATCATGGACTTGGTTCCTATAGCTGATTACACAAACACACCACTTGAGGAGCTTCCCTTGTTACTAGTGCAAGTGACAAGTTTCCTTGGTGATGAAGCATTTTCCGTTGGAGTTGCTATAAGTCATACTTTGTATGATGGTCTTGCTGCCATTCAGTTCATCAATTCATGGGCAAAGTTGGCTCGTGGAGACACATTAGAGCCTCATGAAATGCCCTTTTTGGATCGAACTGTGCTCAAAGTCACATCCCCTCCGTCACCACCACGCTTTGATCACCTAGAGTACAAGCCTTTGCCTCTCATATTAGGAAGATGTGACAATACTGTTGAGAAAAACAAGAAGGTAATCGCCACCATGTTGAAGCTGACAGCAGAACAAGTGGAGAGGCTGAAGAACAAGGCCAATGATGATGAATCAAGAAAACAAGGGTCAAGACCTTTTAGCAGATTTGAAGCTATTGCTGCACATGTATGGAGATGTGCATGTAAGGCTCGTGGATTAGAGGAGAATCAACCAACTGTAGTTCGGTTCAATGTTGATATTCGAAATAGAATAACTCCACCTCTCCCTAGGAACTACTTTGGGAATGCTCTGTCCTTAACCGCAACATCATCACATGTTGGAGAAATCTTATCAAATTCTCTGAGTCATGTTGCTCAGAAAATAAGGAAAGCAATTGAAGCGGTTACACAAGAGTATATAGGCTCACAGATAGATGTCATTAGAGGTCAGAAGGATGTGGATAGTGCAAGGGCTTTATACTTTGGATCAAATGAAGGTAAGAATGCCTTGTTTTATGGGAACCCTAATCTTCTTATTACAAGTTGGATGAGTATGCCTGTGAATGAAGCAGATTTTGGTTGGGGAAAGCCTGTGCATTTTGGTGTAGCGAATATGGCTACACAAGATAGGGTAATACTTTTTCGAAGTCTAGATGGTGATGGTTCTATAGTTCTGACTATACACTTTCAGATGGAACTTATGGAGCTTTTCAAGAAGTTAATTTATGAAGAAATATGA 1353 0.4095 MVTIKASYTILPKKPTPGGFLWLSDIDQVARLYHPRTIYVFDAKHNHDTLIKQMRNSLSKILCHYYPLAGRLRRIEEGGRLELNCNAKGVLLIEAESTKSLHDYGDFLGESIMDLVPIADYTNTPLEELPLLLVQVTSFLGDEAFSVGVAISHTLYDGLAAIQFINSWAKLARGDTLEPHEMPFLDRTVLKVTSPPSPPRFDHLEYKPLPLILGRCDNTVEKNKKVIATMLKLTAEQVERLKNKANDDESRKQGSRPFSRFEAIAAHVWRCACKARGLEENQPTVVRFNVDIRNRITPPLPRNYFGNALSLTATSSHVGEILSNSLSHVAQKIRKAIEAVTQEYIGSQIDVIRGQKDVDSARALYFGSNEGKNALFYGNPNLLITSWMSMPVNEADFGWGKPVHFGVANMATQDRVILFRSLDGDGSIVLTIHFQMELMELFKKLIYEEI 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g02148 450 Pfam Transferase family 1 445 - -
Spst6g02148 450 Gene3D - 1 208 IPR023213 -
Spst6g02148 450 FunFam Tryptamine hydroxycinnamoyl transferase 214 447 - -
Spst6g02148 450 Gene3D - 215 448 IPR023213 -
Spst6g02148 450 Coils Coil 231 251 - -
Spst6g02148 450 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g02148 Spst-Chr6 27180109 27181958 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g02148 2 448 Monolignol Biosynthesis Gene Families AT5G48930 34.076 5.87e-84 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g02148 K13065 - gmx:100778626 677.937