Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g02144 ATGCTCACATTTTCCATGGCGGCCACTGGCAACGACAATGACAATGGCATCATCTATATTCATGGTGGTGACCTTGATTTGAAAATCATCAAGGTGCGACAGTTGCCGAACATGGACATCTTCTCGGAGCATCTCCGTCACTGCGTAACATGTGACACTATCAAATTCCACTTTGACGATGTCTCCGCCCACAGTGAAAGCCAGCGGACGTGCCACAATAGGAGGATCATCACGAACGGCCCGTACGTGACGTTCCACATCCCACTCGCGCATCCAGTGGTGGATTTGGAGTTTCGAGTGAAGGACGACGACGTTTTCGGTGCGCAGACGATGGGAACTGTGAAGATTCTGGCATGGCTGATTGCTACTGGCCAGTTAATTTTCGACTGGTTTCCTATCATTGGACCGTCCGGGAAGCCGGCGAAGCGAGACACAACGTTGCACGTGCAGATGAAATTCATGCCGGTGGAGGAGAATTTGCTTTACCAGCGAGGCATTGCAGCGGATCTGGAGCACTGTGAAGTGAGGAACACGTATTTTCCAGTGAGAAGGGGGAGTTCAGTAAGGTTGTATCAAGAAGCGCAATGTCCCGAATCTGGAAAAGGGAAGTTACCTGAGGTAAAGCTTGAGAATGGAGAGGTTTATAGGCACGGGAAGTGTTGGGAGGGTATTTGTTATGCCATATCTGAGGCTCATCACATGGTGTATTTGGTGGGTTGGTCGATTTACCATAAGGTGAAGCTTGTTAGAGAGCCTACTAGGACGTTCCCACGAGGTGATTTGACGCTTGGAGAGTTGCTGAAGTGTAAGTCTGAAGAAGGGGTGAGAGTGTTGTTGCTAGTTTGGGATGATAAAACTTCGCACGATAAGATTTTACTCAAGACGACTCATGATGAGGAAACCAGGAAGTTTTTTAAACATTCTTCAGTAATGTGTGTTTTGTCGTCTCGGGATCATTATACAGTTGTTCCAGAGGATGACCCTTCAGTATGGGTTTCTAGTGAAAATGATCCTGAAAACTGGCATGTTCAG 1032 0.4767 MLTFSMAATGNDNDNGIIYIHGGDLDLKIIKVRQLPNMDIFSEHLRHCVTCDTIKFHFDDVSAHSESQRTCHNRRIITNGPYVTFHIPLAHPVVDLEFRVKDDDVFGAQTMGTVKILAWLIATGQLIFDWFPIIGPSGKPAKRDTTLHVQMKFMPVEENLLYQRGIAADLEHCEVRNTYFPVRRGSSVRLYQEAQCPESGKGKLPEVKLENGEVYRHGKCWEGICYAISEAHHMVYLVGWSIYHKVKLVREPTRTFPRGDLTLGELLKCKSEEGVRVLLLVWDDKTSHDKILLKTTHDEETRKFFKHSSVMCVLSSRDHYTVVPEDDPSVWVSSENDPENWHVQ 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g02144 344 PANTHER PHOSPHOLIPASE D 21 316 IPR015679 -
Spst6g02144 344 SUPERFAMILY Phospholipase D/nuclease 177 311 - -
Spst6g02144 344 Pfam C2 domain 23 133 IPR000008 -
Spst6g02144 344 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 22 158 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g02144 Spst-Chr6 26415205 26416532 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g02144 317 344 Phospholipase D Gene Family (Wang group) AT4G35790 67.857 2.24e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g02144 K01115 - gmx:100814486 472.241