Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g02101 ATGGCTGAAGATGTCAATAAGCTTTATCAACTGATGAAGGTGTGTGAAAGAGCAATGAATACTGTTGGTGCCCAGGTTATGCTTCCAATGCAAACATCAGATGTTATTTCTGATTGTAAAGCAAAATTTCAGCGGGAGTTTATTGGTGCCTCTGTGGAGCCAATGATGATAATAACAGAACTTTTGGAAGGTTGTTCGCTTCAAAAATACCTGGAGAGCATCTATCCAAGTACTCTGAGTTTAGAGCAATCCATAAGTTTTGCTTTGGATATTTCTCAAGCTATGGAGTATTTGCATGCGAATGGAATCATTCACCGCGATCTAAAACCTGGTAATATGCTTCTTGCCAAAGACAAAATGCAAATTTTACTTACAAACTTTGAGACAGCCAGAGAGGAGATATCTGGTGGGATGACTTCTGAGGCTGGTACATATCGGTACATGGCTCCTGAGGATCCACTTTCAAAAGGTGAAAAGAAATGCTATGACCACAGGGCTGACGTCTATAGTTTTGCTATGGTTCTGTGGGCCATAGTTAAAAATCAAACTCCATTTAAAGGAAGGAGTGACTTGTTGGCAGCATATGCTACTGCAAAAAACATGAGGCCTAGTGTGGAGGGTTTTCCAGAAGTTCTACTTCCCTTATTGCAGTCTTGTTGGGAAGAAGACCCAAAGCTACGACCTGAATTCTCAGAGATCACCCAAATCCTTGAAAAGCTTCTCCACAACTACCACTCAACAGAGATATCACCTGAGGAAAAAGGGTTTCCAACTACAAATATGCAGGAACCTATCCCTAATTATGTTGAAATCAGCTCAGAACATGCACACGAGGCTCGGAGTGTGAATAGCATTGTCTGCGCAGAGGGAGAATCTGAGATCATAGAACATACCCCTAGTCCAGTTTTAGCTAAAAGCAGGCCCAAAATGACCCTTAAGAAGTGCAAGGGTTTATGGTCGTCTTTGCGTAAATGCTTTCTCGGCCGTTGA 990 0.4202 MAEDVNKLYQLMKVCERAMNTVGAQVMLPMQTSDVISDCKAKFQREFIGASVEPMMIITELLEGCSLQKYLESIYPSTLSLEQSISFALDISQAMEYLHANGIIHRDLKPGNMLLAKDKMQILLTNFETAREEISGGMTSEAGTYRYMAPEDPLSKGEKKCYDHRADVYSFAMVLWAIVKNQTPFKGRSDLLAAYATAKNMRPSVEGFPEVLLPLLQSCWEEDPKLRPEFSEITQILEKLLHNYHSTEISPEEKGFPTTNMQEPIPNYVEISSEHAHEARSVNSIVCAEGESEIIEHTPSPVLAKSRPKMTLKKCKGLWSSLRKCFLGR 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g02101 329 Pfam Protein tyrosine and serine/threonine kinase 45 237 IPR001245 GO:0004672|GO:0006468
Spst6g02101 329 Gene3D Transferase(Phosphotransferase) domain 1 10 267 - -
Spst6g02101 329 PRINTS Tyrosine kinase catalytic domain signature 97 115 IPR001245 GO:0004672|GO:0006468
Spst6g02101 329 PRINTS Tyrosine kinase catalytic domain signature 208 230 IPR001245 GO:0004672|GO:0006468
Spst6g02101 329 PRINTS Tyrosine kinase catalytic domain signature 166 188 IPR001245 GO:0004672|GO:0006468
Spst6g02101 329 PRINTS Tyrosine kinase catalytic domain signature 59 72 IPR001245 GO:0004672|GO:0006468
Spst6g02101 329 SUPERFAMILY Protein kinase-like (PK-like) 53 257 IPR011009 -
Spst6g02101 329 ProSiteProfiles Protein kinase domain profile. 1 245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g02101 329 SMART serkin_6 9 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g02101 329 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 46 245 - -
Spst6g02101 329 ProSitePatterns Serine/Threonine protein kinases active-site signature. 103 115 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g02101 Spst-Chr6 22092933 22095964 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g02101 17 246 MAP Kinase Kinase Kinase AT5G66710 52.209 1.88e-83 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Spst6g02101 PK_Tyr_Ser-Thr 6.4e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g02101 - K04427 vum:124848543 484.567