Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g02090 ATGAGTTTCTTTCCTTGTTGCCCATCACAAAAGAGGCTCAGGAAGAAGACATTAAAGAAGAATATCAAGGAATACCATGAAAATAAAATCAAAACCTCATTTTCCAACATCTCTTTCAAAACAGATAGTGGCAAAAGAAAGTTCATAACAGATGAGATAGCAAAGCTTGGGAAAGGAAACATTACATCTAAGTATATTCCTTATCGTGAGCTATGTGTTGCAACTGAGAACTTTCACCCTGCCAATTTGATTGGTGAAGGAGGCTTTGGGAGGGTATACAAAGGACACCTTAAAAGCCTAAATCAAGTTGTTGCTGTGAAACAACTTGACAGGAATGGATATCAAGGAAATAGAGAATTTTTTGTAGAGGTTTTGATTTTGAGTCTTTTGCACCACCCTAACCTTGTCAACTTGATAGGGTATTGTGCCGAAGGTGAACATAGAATTTTGGTATATGAATACATGGTCAATGGTTCTTTAGAAGATCACTTACTTGATTTACATGAAGAAGCAAAGCCTTTGGATTGGCATACTAGAATGAAAATTGCAGAAGGTGCAGCAAAAGGACTTGAATATTTGCATGATGAAGCAAACCCTCCAGTGATATATCGTGATTTCAAAGCCTCAAACATATTATTAGATGAACACTTCAATCCAAAACTATCTGATTTTGGACTTGCAAAGCTTGGTCCAACAGGAGATAAAACACATGTGTCCACCAGAGTGATGGGAACATATGGATATTGTGCTCCTGAATATGCATCAACAGGGCAATTGACTACAAAATCAGATGTTTACAGCTTTGGAGTGGTCTTTTTGGAGATGATCACAGGAAGAAGAGTAATTGATTATTCAAGATCAGAAGAAGAACAAAATTTAGTTATTTGGGCACAACCACTTCTAAAGGATAGGAGGAAATTTATACAAATGGCTGATCCATTGTTAAAAGATAAGTACCCTTTAAAAAGTTTATATCAAGCTTTAGCAGTGGCAGCAATGTGTCTTCAAGAGGAAGCTGATACTCGACCTCTAATCAATGATGTAGTTACAGCCATTGATTTTTTAGCAAGGAAGAAAGTAGAAGTGGATCAACCACATCATACAAAACATATTTCTTATAACAAAGATGACGAGGATAATAATAATAATGAAAATGAAGATGAAGATGATAATGATGACAATGAAGATGAAGACGAAGATGAAAAGGAAAATATTAAAAAGAGTCATATCATAAATAGTAGTGAATACTAA 1251 0.3525 MSFFPCCPSQKRLRKKTLKKNIKEYHENKIKTSFSNISFKTDSGKRKFITDEIAKLGKGNITSKYIPYRELCVATENFHPANLIGEGGFGRVYKGHLKSLNQVVAVKQLDRNGYQGNREFFVEVLILSLLHHPNLVNLIGYCAEGEHRILVYEYMVNGSLEDHLLDLHEEAKPLDWHTRMKIAEGAAKGLEYLHDEANPPVIYRDFKASNILLDEHFNPKLSDFGLAKLGPTGDKTHVSTRVMGTYGYCAPEYASTGQLTTKSDVYSFGVVFLEMITGRRVIDYSRSEEEQNLVIWAQPLLKDRRKFIQMADPLLKDKYPLKSLYQALAVAAMCLQEEADTRPLINDVVTAIDFLARKKVEVDQPHHTKHISYNKDDEDNNNNENEDEDDNDDNEDEDEDEKENIKKSHIINSSEY 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g02090 416 PANTHER OS07G0668900 PROTEIN 23 364 - -
Spst6g02090 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Spst6g02090 416 FunFam Serine/threonine-protein kinase CDL1-like 49 154 - -
Spst6g02090 416 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Spst6g02090 416 MobiDBLite consensus disorder prediction 366 416 - -
Spst6g02090 416 Pfam Protein kinase domain 80 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g02090 416 FunFam Serine/threonine-protein kinase PBS1 155 370 - -
Spst6g02090 416 ProSiteProfiles Protein kinase domain profile. 78 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g02090 416 Gene3D Phosphorylase Kinase; domain 1 35 154 - -
Spst6g02090 416 CDD STKc_IRAK 84 349 - -
Spst6g02090 416 SUPERFAMILY Protein kinase-like (PK-like) 62 351 IPR011009 -
Spst6g02090 416 Gene3D Transferase(Phosphotransferase) domain 1 155 381 - -
Spst6g02090 416 MobiDBLite consensus disorder prediction 380 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g02090 Spst-Chr6 21788582 21791106 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g02090 60 389 Glycoside Hydrolase AT3G07070 65.559 5.18e-156 445
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Spst6g02090 Pkinase 6.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g02090 - - gmx:100790474 646.351