Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g02031 ATGGTGGATGGTTTTGTAACTTCCGAGGTTTTTCAAGGTTTGGTGTTTGTTGATCGTGGTTTCCTGTTAGATGGTTCAGAATCCTTGTTTTTCTTGTATTCTGAAACTGTTGGTGGTTTACGCAGAAGCGATCTGTGTTGGGTGTTGTCAAGTTTCGATCAAGCTAAGTACATGGTTGAATTGGAAATCCAAGTCCCCACCCCATTTGACCCATTTGCTGAGGCGAGAGAATCGGATGCCCCCGGAGCGAAGGAGTATGTGCACATTCGGATCCAGCAGAGGAATGGGAAGAAGAGTCTGACCACAGTGCAAGGCTTGAAGAAGCAGTTCAGCTACGAGAAGATCCTCAAGGACCTCAAGAAAGAGTTCTGCTGCAACGGCAATGTGGTGCAGGACAAAGAGCTTGGCAAGATAATTCAGCTCCAAGGTGACCAGCGCAAGAACGTCTCACACTTCTTGGTCCAGGCCGGTCTTGTCAGGAAGGACCAGATCAAGATTCATGGTTTTTGA 510 0.4745 MVDGFVTSEVFQGLVFVDRGFLLDGSESLFFLYSETVGGLRRSDLCWVLSSFDQAKYMVELEIQVPTPFDPFAEARESDAPGAKEYVHIRIQQRNGKKSLTTVQGLKKQFSYEKILKDLKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSHFLVQAGLVRKDQIKIHGF 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g02031 169 Gene3D - 49 169 - -
Spst6g02031 169 ProSiteProfiles Translation initiation factor SUI1 family profile. 87 157 IPR001950 GO:0003743|GO:0006413
Spst6g02031 169 FunFam Eukaryotic translation initiation factor SUI1 59 169 - -
Spst6g02031 169 CDD eIF1_SUI1 85 168 IPR005874 GO:0003743
Spst6g02031 169 Pfam Translation initiation factor SUI1 84 157 IPR001950 GO:0003743|GO:0006413
Spst6g02031 169 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 63 169 - -
Spst6g02031 169 NCBIfam translation initiation factor SUI1 62 169 IPR005874 GO:0003743
Spst6g02031 169 SUPERFAMILY eIF1-like 57 169 IPR036877 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g02031 Spst-Chr6 20504498 20505382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g02031 58 169 Eukaryotic Initiation Factors Gene Family AT5G54940 83.036 2.26e-68 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g02031 K03113 - gmx:100787664 231.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g02031 6 20504498 20505382 Spst6g02031 6 20504498 20505382 ECH
Spst6g02031 6 20504498 20505382 Spst8g00871 8 7741891 7743293 PCT