Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g02001 ATGGATGAGATGGATTTCTTTGCCGAGAAGAAGAAGAAGAAAAGGGTAGCTGATGATGATCAAATTCTGCACCAAACGGAGCTTCATGTGGATACTAGCTTAGATCTCCTTACAAAGAGTTCCACTTCTAATGGATCGACTATGGGAGAAGGATCATCGGAAGAAAGGGGTAATAAAAGAAATGAGTTTGCAGCTATGGTAGCTGAATTGCACCACATAAATGCTGAAAATCAACGCTTGAGAGAACTGGTTGATGAGGTGAACGATAAGTATCATGGTCTACACGATCAACTTATGAAACTGATGGAAAAACAACGTAAGAATGAGGGTAAGAAAGCTGATATGATTCCAAAGCCATTCTTGGATATTGGAGTTGCTGTGAAGGAAGAGACTTCGCAGCAATATTCCAAGGGAAATCTGCAAGAAAGCAAAAACATGATTGACTTGAGTCAGAAGATTTGCACTACAAGAGATGTTACTCAGTTGGACCCATCTGACAAAGCTATTCCAAAGTGGATCTCAAACGAAATCACAAGATTGAGTTCTTTCAAGGACGTCGATGAATCCTCAGAAACCAAGTCAATGATCAAGAAAGCTCGCGTGTCAGTTCGATCAAGATCTGTTTCTTCTATGATTTCTGATGGATGCCAATGGAGAAAGTATGGGCAGAAGATATCAAAAGGGAATCCATGTCCAAAAGCTTATTATCGATGTTCAATGGGGACTCGTTGTCCTAATGATGAAGTTGCGGCAGCTAACTATTGCCCTAATGTCCCTTTGAAGGTGCAAAGGAGTGCAGAGGATCAAGGTGTGTTGATCACAACATATGAAGGACAGCATAATCATGTTCTCCCTCCCAGTGCCAAAGCAATGGCATCCACCACATCTGCAGCTGCATCAATGCTTCTTTCAGGATCAATGCCAAGCTCAGATGGTCTGCAACATCCAAATATATTAGAAAGTGCAACACTACCATTTTCACATAACTTAGCAACCCTCTCAGCTTCAGCTCCATTTCCAACTATTACTTTGGATCTCACTAAAAGTGCCACCAATACTAGCTCTCAACAGCTACCACAAGAGGCACCAAATGATTACCAACATAGCTTCCTTTCCCCACTTTTGGCTCCAAACATTTTTGACCCAAGTAAGCTTTCTAGCTTACATGGCTCTCAGGGAACAGAAAGTGCTTCACTTTTTGACACAGTAAAAGCAGCAACAGCTGCTATCACTACAGACCCCAAATTTAGTGCAGCTCTTATGGCTGCCATAACATCTATTATTGGAAGCTACAACAAGTTCAAAAGCACTTCATTTGATTTATTTGAAAGGTGTCACATTGGCATTCAGAAGAGACGCTATAATATTGCTGGATTCTGTGATTTTGGCTCCTGGGCAGCTTGCTTTTGTTCGAAGATTGAAACTTTCTGTGAACATGTAGCTGGTAAAAGTGTAAACTTGAAAATGATAATATTTACGTGCTATTGGCTACCTACCCATCCACCATATCTTGGTGATCTAAGACTGATAAGTAGATACTTGAACAAGCGCAGGAAGCTGAATTGGACTCTCAATTTGCAATCCCACTTGCATAGCAACACTTGCCATGCCCTTGCTCACCTCCTCTCTCACATTTCTAAGTACAAATATTCACATGAAACTCCAACTAAAACTCTCAAAACTCCTGATAATGGAAGTGGTCGAATGGATCAAGAAAATCAAGTAAAGGAGCCTACGTGCACTGAAGTTAATGATTATGATGTTTTGGATCCTATAAGCCGGAAGGATATGCAGGAGATCCAGGGAACCATTGATTGGGTTGGCGAAATGGACATGGATTCTATTTCCAACAAGATGGTTGTAGATGATATAGGACATATGATGGAAATAGAGGAAATGTCTACTCAAGGAAGTGGTTTTGATAAGGAGCAGAAGCTAATAAATCAGTTCGAGCTGGTTATGAAAGGAATCAAAGAAGATCTTATTTGTGATAGTGGTTTAATCCCCTTGAACATGGGACTAGATGAGGAACATAGTGATGGCTGTGAAGTTGGGTTGTCAAATTACCCAGAAATCTTGGAAGATGGAGAAATTTCTGGAAGTAGAAGAGGTTCAGAAGCATGA 2124 0.4073 MDEMDFFAEKKKKKRVADDDQILHQTELHVDTSLDLLTKSSTSNGSTMGEGSSEERGNKRNEFAAMVAELHHINAENQRLRELVDEVNDKYHGLHDQLMKLMEKQRKNEGKKADMIPKPFLDIGVAVKEETSQQYSKGNLQESKNMIDLSQKICTTRDVTQLDPSDKAIPKWISNEITRLSSFKDVDESSETKSMIKKARVSVRSRSVSSMISDGCQWRKYGQKISKGNPCPKAYYRCSMGTRCPNDEVAAANYCPNVPLKVQRSAEDQGVLITTYEGQHNHVLPPSAKAMASTTSAAASMLLSGSMPSSDGLQHPNILESATLPFSHNLATLSASAPFPTITLDLTKSATNTSSQQLPQEAPNDYQHSFLSPLLAPNIFDPSKLSSLHGSQGTESASLFDTVKAATAAITTDPKFSAALMAAITSIIGSYNKFKSTSFDLFERCHIGIQKRRYNIAGFCDFGSWAACFCSKIETFCEHVAGKSVNLKMIIFTCYWLPTHPPYLGDLRLISRYLNKRRKLNWTLNLQSHLHSNTCHALAHLLSHISKYKYSHETPTKTLKTPDNGSGRMDQENQVKEPTCTEVNDYDVLDPISRKDMQEIQGTIDWVGEMDMDSISNKMVVDDIGHMMEIEEMSTQGSGFDKEQKLINQFELVMKGIKEDLICDSGLIPLNMGLDEEHSDGCEVGLSNYPEILEDGEISGSRRGSEA 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g02001 707 MobiDBLite consensus disorder prediction 34 52 - -
Spst6g02001 707 Coils Coil 70 104 - -
Spst6g02001 707 SMART WRKY_cls 212 284 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst6g02001 707 SUPERFAMILY WRKY DNA-binding domain 208 285 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst6g02001 707 MobiDBLite consensus disorder prediction 34 58 - -
Spst6g02001 707 Gene3D WRKY domain 197 286 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst6g02001 707 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 42 432 IPR044810 GO:0003700
Spst6g02001 707 MobiDBLite consensus disorder prediction 557 576 - -
Spst6g02001 707 Pfam WRKY DNA -binding domain 214 282 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst6g02001 707 ProSiteProfiles WRKY domain profile. 207 285 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst6g02001 707 MobiDBLite consensus disorder prediction 555 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g02001 Spst-Chr6 19799539 19806306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g02001 3 432 WRKY Transcription Factor Family AT1G62300 38.478 1.05e-77 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Spst6g02001 WRKY 9.1e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g02001 - - pvu:PHAVU_006G047300g 568.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g02001 6 19799539 19806306 Spst8g00900 8 7956262 7959116 PCT