Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01973 ATGTATGATTTTAAAGCTTCTGTTATCCATCCCTTTCACGGTGAGTTGCGCAGCTCCGACGAGCCTTGTAATGAGCCCAATTTAGAAACCCTAGGCTGTGTTGTTTCCTCTTCAGTTCAAACCCTTTCTCTTCAGCACCATCCGAGTGACGATTTGCACGGAAGCCCTGCTGCACCGTATTCGGGTGGAAAAGGAACTACTACAGATGCACTTCTGCTGGATGGTGTACATGACCATGACATGCCTGTCCCCAAGAAACGACACGAGCCACCAAGTGCTCCTCTTGTGGCAGTTGCAGCACCTGCCTCCATGAACAGTTTGCAGGTGAAGAAACCCGATTCCCCACAAAACAAGAAAGTTTCTACTCAATGTTTGATTTGGGAGGGTGTCAAGAATTTGGCTACCGATCATGCACCAGTGGTGCCCATTTCACTATTTGTGGCTGTTCTCTGTCTTTGCTTGGTCATTGGTCACATGCTTGAAGAGAATCGATGGGTTAATGAATCCATTGTTGCCATTATAGTAGGAATCATTGCTGGAATTATACTATTATTGGTCACCAAAGGAAAGAGTTCTCACATCCTTACATTTAATGAAGAACTATTCTTCATATATCTCCTTCCTCCCATAATATTCAATGCAGGATTTCAGGTGAAGAAGAAACAGTTCTTCCATAACTTTTTAACCATCATGTTGTTTGGTGTCATTGGTGTTTTTATTTCAACGTCTATTATTACTTGCGGCAGCTGGTGGATATTCCCCAAGTTGAAGTTGCTTGGCCTGAGTGGACAAGATTATCTTGCTATAGGAACAATTTTCTCATCAACGGACACAGTTTGTACACTGCAGGTTCTCCATCAAGATGAAACTCCTCTACTATACAGCTTAGTCTTTGGGGAAGGAGTGGTAAATGATGCCACCTCAGTTGTTCTCTTCAATGCAGTGCAAAAGCTTGATGTTACAAGATTTAGCAGCAAGACATTCCAAGTTATTGGAGATTTCTTCTATCTATTCGTGTCAAGCACTGGTCTTGGAGTTCTAGCTGGCCTTCTCACATCATATATCTTGAAAGCCTTATGCTTTGGAAGACATTCAAGTATTCGAGAAATTGCATTGATGTTGTTAATGGCATACCTGTCCTACATGTTGGCAGAGCTATTTGATCTAAGTGGAATCCTCACTGTTTTCTTTTCTGGAATACTAATGTCACATTATGCATGGTATAATGTGACTGAAACTTCAAGAATCACAACCAGAAATGTGTTTGCGACAATGTCATTTATTGCAGAAACCTTCATATTTCTATATGTGGGCATGGACGCCCTAGACATTGAGAAGTGGAAGATGACTCAATTAAGTTTTGGAAATTTGCTGGGGATATACAGTTCCTTAATCCTATTGATATTGCTTGGGCGCGCAGCATTTGTGTTCCCTCTCTCTGCTCTTGCCAATTATACGAACACACGTGCTGCTTCTGACCAAGCATCAAGCATCACTTTCAAACATCAGATAATCATTTGGTGGGCTGGACTAATAAGGGGAGCTGTCTCTATTGCTCTGGCTTTCAAACAGTTTACATATTCTGGAGTTACTTCTGATCCAGTTAATGCAACAATGATTACCAACACCATTATTGTTGTCCTTTTCAGCACACTGGTGTTTGGTTTTTTCACAAAACCACTAATCAGATATCTGCTACCCCACACGGCTACAAGGAAAAACATCATCCATGAAGAGTCAGGTCCACCAGTTGAGGACTTAAATCTACCTTTGCTATCTCTTGATGAGTCAGCAGCAACCAACATCAGCCGCGCAAAGGAAAGTTTATCCATGTTATTAGAAAGTCCTGTCTTCACCATACATCACTATTGGAGGAGGTTCGATGATGCTTACATGAGACCCTTTTTTGGGGGACCTCATCATAATGGGTCAGAGTGCTAG 1941 0.4194 MYDFKASVIHPFHGELRSSDEPCNEPNLETLGCVVSSSVQTLSLQHHPSDDLHGSPAAPYSGGKGTTTDALLLDGVHDHDMPVPKKRHEPPSAPLVAVAAPASMNSLQVKKPDSPQNKKVSTQCLIWEGVKNLATDHAPVVPISLFVAVLCLCLVIGHMLEENRWVNESIVAIIVGIIAGIILLLVTKGKSSHILTFNEELFFIYLLPPIIFNAGFQVKKKQFFHNFLTIMLFGVIGVFISTSIITCGSWWIFPKLKLLGLSGQDYLAIGTIFSSTDTVCTLQVLHQDETPLLYSLVFGEGVVNDATSVVLFNAVQKLDVTRFSSKTFQVIGDFFYLFVSSTGLGVLAGLLTSYILKALCFGRHSSIREIALMLLMAYLSYMLAELFDLSGILTVFFSGILMSHYAWYNVTETSRITTRNVFATMSFIAETFIFLYVGMDALDIEKWKMTQLSFGNLLGIYSSLILLILLGRAAFVFPLSALANYTNTRAASDQASSITFKHQIIIWWAGLIRGAVSIALAFKQFTYSGVTSDPVNATMITNTIIVVLFSTLVFGFFTKPLIRYLLPHTATRKNIIHEESGPPVEDLNLPLLSLDESAATNISRAKESLSMLLESPVFTIHHYWRRFDDAYMRPFFGGPHHNGSEC 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01973 646 Pfam Sodium/hydrogen exchanger family 147 562 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Spst6g01973 646 PANTHER SODIUM/HYDROGEN EXCHANGER 118 636 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Spst6g01973 646 Gene3D - 262 314 - -
Spst6g01973 646 PRINTS Na+/H+ exchanger signature 230 238 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Spst6g01973 646 PRINTS Na+/H+ exchanger signature 201 212 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Spst6g01973 646 PRINTS Na+/H+ exchanger signature 270 280 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Spst6g01973 646 PRINTS Na+/H+ exchanger signature 215 229 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Spst6g01973 646 MobiDBLite consensus disorder prediction 44 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01973 Spst-Chr6 19309298 19319922 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01973 131 646 Antiporters AT5G55470 71.209 0.0 754
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01973 - - gmx:100813332 905.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01973 6 19309298 19319922 Spst6g01973 6 19309298 19319922 ECH