Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01970 ATAGTTTTGGTAAGGTTTGGAATCACGTCAACTGTTGGAAATGATCCACACACGGGTTGTCTGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAGAGCATGGAGCCAGAGAAGAACCCTAATCTCAAAGACTGGAAGCTACGGCGGCGCGTGGATTCGTTCAATTTAGAAGCTGGAACTGGAATACTTTCTAAGGTGCGTTGGACAACGACATTGAGCTTAGCATTTCAAAGCATAGGGGTTGTGTATGGTGACATTGGTACATCACCTCTTTATGTGTTCTCGAGCACCTTCACTGACAAAATCAAGGACCCTGATGACATTCTCGGAGTCTTGTCCATCATCATCTACACCATCGTTCTCATACCCTTGATCAAATATGTCTTCATCGTATTGTGGGCCAACGACAACGGCAACGGTGGAGCGTTTGCGCTGTATTCGTTATTATGTAGACACGTGAAGATCGGTTTGATTCCAAATGAACAACCAGAGGACAGGGAGCTTTCCAACTACAAACTCGAAACGCCGTCGCCTCACGCTAAACGCGCCGACAAGATAAAGCAGAAGCTTGAGGGAAGTAATTTTGCGCGGTTTGTGCTTTTGCTTCTTGCTATAGTGGGAGCTTCGATGGTTATAGGAGACGGGATTTTTACGCCAACAATGTCAGTCCTTTCAGCAGTCAGTGGGATCAGTACAACATTAGGTCAAGATATACGTGTAATTTCAGGATCTGAGGCCACGTTTGCTGACTTGGGTCACTTCAATGTTCGAGCCATTCAAATAAGTTTTTCTTGCATCACATGTCCAACAATTTTGATTGCATACATTGGGCAAGCAGCATATCTACGGAAGTTCCCTGAGCATGTGGCCACTACTTTCTACAGTAATATTCCGAAACCCATATACTGGCCAACATTTTGTGTGGCTGTTGCTGCTTCGATTATAGCTAGCCAAGCAATGATATCAGCATCGTTCTCCATTATATCCCAGGCCCTAAACCTAGGTTGTTTCCCAAGAGTAAGGGTAGTGCACACTTCCGTTAAACATCAGGGTCAGGTGTATATTCCTGAGGTCAACTACATATTCATGATTGCATGTATTGTGGTGTGTGCTGCCTTCAAGACTACAGAGAAGATTAGCCATGCATATGGGATTGCAGTAGTTGGTGATATGATGATCACGACAACTATGGTTTCTCTTATAATGCTTGTTTTATGGAAAAAGAATATATGGATCGTGGGTCTGTTCTTTTTGGGATTCGGTTCCATTGAGCTAGTTTATTTCTCATCTCAACTCACCAAGTTCGTAGGAGGAGGGTATCTTCCAATTGTATCAGCCTTGTTCTTGACTGGGATGATGGGAATCTGGCATTATGTGCACAAACAAAGGTACATGTTTGAACTGAAAAACAAGGTACCGATTTCATATTTGAAGGAATTGGCAAACAACCCAGATGTAAGGAGAGTTCCCGGAATTGGACTTTTGTATTCAGAGCTGGTGCAAGGAATTCCTCCAATATTCCCACATCTCATAGACAGCATACCATCTATCCATTCAATTCTAGTGTTTGTGTCCATCAAGGCTATTCCAGTGAGTAGAGTTGAATTGGAGGAGAAGTTTTTGTTTCAACAGATGGAACCAAGAGAGTACAGAATATTTCGTTGTGTTGTGAGGCATGGTTACAGTGACGTGCTTGAAGATTCTGCGGAGTTTGAGTCGCAGTTGATACAAAATCTGAAGACGTTTATTGAACAAGAGAACAATTATATGGTGGAGGTGGAGGTGGAGGTGGAGGGAAGTGCAACTGAAACTACAACTCAAGAAGAGGCACAGGTTGAGAATGGTGATCAAATAGCAGGAGTCCCTCAAACGCAAGCTGAAGACAATCAATTATCATGGTCATTCGGGGGGACTGAAAATAACAGCACCAAGTCATCCATAGCTGAAGAGGAAGTGAAATTCGTAGAAAAAGCGTTGGAGAAGGGCGTGGTGCATATGCTGGCAGAAGCAGAGGTTGTGGCTCATCCAAATTCCTCCATCTTGAACAAGATCGTTGTGAACTACGTCTATAGTTTCTTCCGAAAGAACTTTAGACAAGGCCTGAATTCCATGGCATTTCCATCTGACAAACTTCTCAAGGTTGGAATGACATACAAAATATGA 2190 0.432 IVLVRFGITSTVGNDPHTGCLEEEEEEEEEEEEEEEEEEEESMEPEKNPNLKDWKLRRRVDSFNLEAGTGILSKVRWTTTLSLAFQSIGVVYGDIGTSPLYVFSSTFTDKIKDPDDILGVLSIIIYTIVLIPLIKYVFIVLWANDNGNGGAFALYSLLCRHVKIGLIPNEQPEDRELSNYKLETPSPHAKRADKIKQKLEGSNFARFVLLLLAIVGASMVIGDGIFTPTMSVLSAVSGISTTLGQDIRVISGSEATFADLGHFNVRAIQISFSCITCPTILIAYIGQAAYLRKFPEHVATTFYSNIPKPIYWPTFCVAVAASIIASQAMISASFSIISQALNLGCFPRVRVVHTSVKHQGQVYIPEVNYIFMIACIVVCAAFKTTEKISHAYGIAVVGDMMITTTMVSLIMLVLWKKNIWIVGLFFLGFGSIELVYFSSQLTKFVGGGYLPIVSALFLTGMMGIWHYVHKQRYMFELKNKVPISYLKELANNPDVRRVPGIGLLYSELVQGIPPIFPHLIDSIPSIHSILVFVSIKAIPVSRVELEEKFLFQQMEPREYRIFRCVVRHGYSDVLEDSAEFESQLIQNLKTFIEQENNYMVEVEVEVEGSATETTTQEEAQVENGDQIAGVPQTQAEDNQLSWSFGGTENNSTKSSIAEEEVKFVEKALEKGVVHMLAEAEVVAHPNSSILNKIVVNYVYSFFRKNFRQGLNSMAFPSDKLLKVGMTYKI 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01970 729 Coils Coil 17 44 - -
Spst6g01970 729 MobiDBLite consensus disorder prediction 8 49 - -
Spst6g01970 729 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 243 728 IPR003855 GO:0015079|GO:0016020|GO:0071805
Spst6g01970 729 MobiDBLite consensus disorder prediction 20 44 - -
Spst6g01970 729 Pfam K+ potassium transporter 242 572 IPR003855 GO:0015079|GO:0016020|GO:0071805
Spst6g01970 729 Pfam K+ potassium transporter 84 241 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01970 Spst-Chr6 19270207 19276139 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01970 242 729 Inorganic Solute Cotransporters AT4G13420 49.595 2.23e-167 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01970 K03549 - gmx:100814313 702.975