Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01959 ATGGCAGAAACTGCACTGTCTTTGGCTGGTAAGCATGTGCTTCCAAAATTGTTGGAAGCTGTACATAAGCTGAGAGATCTCCCGAAAGAAGTTACAGAAGTTACAGATGAACTAGAAAGCTTTCAAGATTTCATCAATAATGCAGACAAAGTGTCTGAAGCTGAAGAAGATAAGGAAAAGCGTGATAGAATAAGAAAAAGGTTGATGAGGCTGAGAGAAGCAGCTTTTCGTATGGAAGATGTCCTCGATGATTATAAGATATGTCTGGAAAAGCAACCTGAAGATGATCCTCGATGTGCAGCTTTACTCTGTGAGGCTGTTGAGTTCATCAAAACTCATATACTTCGCCTTCAAATAGCGTATCAGATTCAGGATGCTAAATCACATGTTCGTGAGGAAAAAGATGGTTTCGAAAAGCTTTTTCCTGAAGGACATGGATCCGACGGTTCTAGTGGAAATGAAACTTCCACATGGCACAAACTTCGAATGGATCCTCTCTTTATTAAGGAAGAAGAGGTTATAGGCTTTGAAGACCCTATACGTACATTGAAATATTGGTTGACAGAGGGACGAAAAGAGCGCACTGTCATCTCTGTCGTGGGAATGGCAGGATTGGGAAAAACCACTCTTTCTAAGCAAGTTTTTGACAGGGTCCGTGCAGACTTTGAGTGCCATGCATTGATCACAGTATCTCGACCCTATACCGTTGAAGGATTGCTGAGGGATTTGACGAACAAGCTTTGCAAAGAAAGAATGGAGGATCCTCCACCGGATGTTTCCACCATGGATCGAAGGTCGTTGATAGAAGAAGTCAGTAATCGCTTGCGCAACAAAAGGTATGTTATCTTGTTTGATGACGTATGGAATAAAACATTTTGGGATGACATCGAATCTGCAGTTATTGATGATAAAAAGGGAAGTAGGATATTGATCACCACCCGGGATGTGAAGGTTGCAGATTTCTGTAAGAAATCTTTGTTTTTTGAGGTGTATAAGCTAGGAACTCTAAGTAAAGAAAAATCATTGGAGTTGTTATGTAAGAAAGCATTTGGATATGGTTTTGATGGAAGTTGTCCAAAAGGTTATGAAGAAGTAGGTCTGGACATTGTTAAGAAGTGTGAATGTTTACCTTTAGCAATTGTGGCCATTGGTGGTCTTTTATACAGAAAATGTAAAAGTCCACACGAATGGGGCCTGTTTAGTCAAAATCTAAGGTTAGAGTTGGAGAATTCCGAGCTACACAGTGTAACAAAAATTTTAAGTTTAAGTTACGATGATCTGCCATACAATCTCAGGCCATGTTTGTTGTATTTCGGAATGTATCCTGAAGACTACGAAGTTAAATGTGGTCGATTAATTAGCCATTGGATAGCTGAAGGGTTTGTCAAACATGAAAGTGGAAGAACTTTAGAAGAAGTAGCACAAGACCATTTAATAGAGTTGATCAGTAGAAGTTTGGTGCAAGTGTCATCATTTAGCATAGACGACAAAGTTAGAGGATGTCGTGTTCATGACTCAATACATGAAATGCTCCGTGGAAAAATTAAGGATACGGGGTTTTGTCAGTATATTGATGAGCATAATCAATTAGTGTCAAGTGGTGTCATTAGACGCTTAACCATAGCAACCAGTTCATATGATTTGAGCGGAACTATTGAAACATCACATGTTCGGTCAATTCTAATATTAACCGAGAAAAATTTATCTGAACACTTCGCCGGCAGATTGCTTGCAAAATACATGCCATTGAAGGTGCTTGATTTTGAATCTGCTCCATTATATCATGTTCCTGAAAATTTAGGGAATTTATTCCACTTAAAGTATTTAAGCTTCCGGCGTACATGGATAAGTAGCCTTCCAAAATCCATTGGTAAGCTTCAGAACTTGGAGACCTTGGATGCACGATCAAAAACACTCTTTGACATGCCAAATGAGATTACTAAGCTTAGAAAGCTACGTCATCTTTTGGGTACGCCAATATCTTGCATTGCAGTGGATGATAGTCTTGGAGGCATGACATCCCTCGAAAAGATACATGTACTGAAGATAGATCCAGATGGAGTGTTAATTAGAGAGCTTGGAAAGCTAAAGCAATTAAGGGATCTGAGGCTTACTCATTTTATGCCAGAACATGGTAACACTCTTTCTTCCTCAATAAACGAGATGCAACACTTGGAGAAACTACATGTTTACGTAAAGGATGGGAATGGGGTAATTAACTTGGACATTACCTCTTCGCATTTAACTCTAAAGAAGCTTCACCTGCTTGGGATTTTAAAAGAGTTGCCAAATTGGATTCCCCGGCTCGGAAATCTTGTGAAACTGTCTTTTGGTGAATCCAAGTTAACTAACGATCCATTGAAGTCTCTGGAAAATTTGTCAAATTTGGTGTTCCTCTCTTTCGACTCTTATTCTTATGAAGGGGAAACTTTATATTTTCAAAAGGGAGGATTTCAGAAACTAAAGGAACTACGGCTCAAAGGTTTGTTTAAATTGCATTCCATCTTTATTGATGAAGGAGCACTGCAGTCTTTGAAAAAGCTTCTGATAAGGACCATCCCACAACTGAAGACAGTACCCTCTGACATTCAATACTTAGAGAACCTTGAAGTTCTCGACTTCTATATGCCTACTGAGTTTCAGCAGAGGGTTGGTCCCAGTGGAGAAGATCATTGGATCATCAAACATATACCCCATGTAAATTTTATCACGAAAAGTCCTTATGTGCTATCTTTTGAGAAGATATCAAGACTATTTCGTAGAACAAGACAAAACGATGTTGATCCAACTGACTAA 2796 0.3909 MAETALSLAGKHVLPKLLEAVHKLRDLPKEVTEVTDELESFQDFINNADKVSEAEEDKEKRDRIRKRLMRLREAAFRMEDVLDDYKICLEKQPEDDPRCAALLCEAVEFIKTHILRLQIAYQIQDAKSHVREEKDGFEKLFPEGHGSDGSSGNETSTWHKLRMDPLFIKEEEVIGFEDPIRTLKYWLTEGRKERTVISVVGMAGLGKTTLSKQVFDRVRADFECHALITVSRPYTVEGLLRDLTNKLCKERMEDPPPDVSTMDRRSLIEEVSNRLRNKRYVILFDDVWNKTFWDDIESAVIDDKKGSRILITTRDVKVADFCKKSLFFEVYKLGTLSKEKSLELLCKKAFGYGFDGSCPKGYEEVGLDIVKKCECLPLAIVAIGGLLYRKCKSPHEWGLFSQNLRLELENSELHSVTKILSLSYDDLPYNLRPCLLYFGMYPEDYEVKCGRLISHWIAEGFVKHESGRTLEEVAQDHLIELISRSLVQVSSFSIDDKVRGCRVHDSIHEMLRGKIKDTGFCQYIDEHNQLVSSGVIRRLTIATSSYDLSGTIETSHVRSILILTEKNLSEHFAGRLLAKYMPLKVLDFESAPLYHVPENLGNLFHLKYLSFRRTWISSLPKSIGKLQNLETLDARSKTLFDMPNEITKLRKLRHLLGTPISCIAVDDSLGGMTSLEKIHVLKIDPDGVLIRELGKLKQLRDLRLTHFMPEHGNTLSSSINEMQHLEKLHVYVKDGNGVINLDITSSHLTLKKLHLLGILKELPNWIPRLGNLVKLSFGESKLTNDPLKSLENLSNLVFLSFDSYSYEGETLYFQKGGFQKLKELRLKGLFKLHSIFIDEGALQSLKKLLIRTIPQLKTVPSDIQYLENLEVLDFYMPTEFQQRVGPSGEDHWIIKHIPHVNFITKSPYVLSFEKISRLFRRTRQNDVDPTD 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01959 931 Gene3D - 5 120 - -
Spst6g01959 931 Gene3D - 335 423 IPR042197 -
Spst6g01959 931 Gene3D - 163 327 IPR027417 -
Spst6g01959 931 FunFam Probable disease resistance protein At1g61300 158 325 - -
Spst6g01959 931 Pfam NB-ARC domain 177 426 IPR002182 GO:0043531
Spst6g01959 931 FunFam Probable disease resistance protein At1g63360 424 512 - -
Spst6g01959 931 PRINTS Disease resistance protein signature 373 387 - -
Spst6g01959 931 PRINTS Disease resistance protein signature 196 211 - -
Spst6g01959 931 PRINTS Disease resistance protein signature 624 640 - -
Spst6g01959 931 PRINTS Disease resistance protein signature 274 288 - -
Spst6g01959 931 Pfam Rx N-terminal domain 8 93 IPR041118 -
Spst6g01959 931 PANTHER DISEASE RESISTANCE PROTEIN RP 33 829 IPR044974 GO:0006952
Spst6g01959 931 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 438 IPR027417 -
Spst6g01959 931 SUPERFAMILY L domain-like 502 904 - -
Spst6g01959 931 Gene3D - 424 514 IPR036388 -
Spst6g01959 931 Gene3D Ribonuclease Inhibitor 547 885 IPR032675 -
Spst6g01959 931 Coils Coil 54 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01959 Spst-Chr6 19157784 19160579 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01959 197 394 WRKY Transcription Factor Family AT5G45050 26.131 2.89e-11 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01959 K13457 - gmx:121174068 1048.11