Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01955 ATGAGGCAAAAGACCAACAACACAGATTCTAGTGGTTTCTTGGGAAACATTTCTTCTAATTTTCTCAGATCAATCTCTTCTTCCAATCGCAAACCCACGTCTTCTTCCTTCTCAAATCCTAAATCCCCAAATTCTGACGCTGAAAACACTCCCCCTACCCATCCAAACATTTCCCTCAATCACCACCACGAATCGAAGCCTTACGACCCATTTTCCCACAGCAACTCACATGTTGTGGTTAGAATTAAGCCTGAGAATATCAATGGAAAAGAGGGAGACTGGGAGATTAAAAAGGTTTCTTCTGATGCCCTGCGTGTCGGGGACATAAAGTTCACGTTTGATGAAGTTTTTGATACCAGCTCCAATCAGGAAGATGTTTTTCAGTCAGTGGGTGTTCCCTTGGTTAGAAATGCCTTAGCTGGTTACAACACTACAATTCTGTCGTTTGGCCAGTCTGGAAGTGGAAAGACTCACACAATGTGGGGTCCCCCAAGTGCCATGGTTGATGAGTCCTTGCGTTCTAGTCAACTGGGAATTGTTCCTCGGATCTTCAGAATGTTATTTTCTGAGCTAGAGAGAGAGAGGCTTACTTCTGATCAGAAGCAGTTCAACTATCAATGTCGTTGTTCATTTCTTGAGATATACAACGAACAGATTAGCAATTTACTCAACCCTATCCAGCAGAACCTTGAGATGAAGGATGATTCAAGAAATGCACCTTATATTGAGAATCTGGTTGAGGAATACATCACTAACTATGATGATGTGGCACAAATTTTGATTAAGGGCCTTTCAAGGAGAAAAAAGGGAGTGACAAGCTTAAATTCTAATAGCTCTAGATCACACATAGTTTTCACATTTGTCATTGAGTCTTTGAGCAAGGGAACCACAAAGGGTTTTTCCAGTAGCTCAAAAACTAGCAGAATCAGCCTTATTGATCTTGCTGGACAGGACTGGGATGAAGTTGGTGATGGAGGTAGCCAATGTCCAAAGAAAAGCAGACATGTTGAGAAATCACTATCTGGGCTTGAGCATTTAGTGGATGCTCTGACTAACAAATCTCAGTCTGGAAAAAATGAAGACATGCCACACAGCGACTCCTGTTTAACACGCTTACTGCAAGAGCCACTTGGTGGAAATGCCAAACTCTCAGTAATATGTTCCATCTCCCCTGATAACAAGAGTAACGATGGAACCCTGCGCACACTCAGATTTGGGGAGCAAGTTAGATCCGTCAGAAATGAACCAGTTATCAATGTAATAAAGGAGACTGATGTTGATTTGAGTACTAACGTCAGACACTTGAAGGAAGAACTTATTAGAGCAAAGGCTGATGTTCATAGCTCAGCTGGGAGTAAAGATGGTTACTTCCAAGGACATAATGTGCGGGAAAGCCTGAATCAGATGAGAGTCAACTTAAACCGCTCTCTTCTCCTATCCAACATAGATAGTGATACCGATGAGCGTGTAAATGTCAATGAGGATGACATACAGCAATTACGCCAGCAGATTGTTGAATTGGATAGTTCATCTGAAGGAAATCCAAAGGACATATCTGTCAATGAAAATTGTGGCCAGTTCTGTTCTGTTGAGGAAAATTGTGATGCAGACACCACCAGTGGTGATGAAATTGAAAAGTCTGAGGTGTGCTGCAGAAAAACATTGAGCAACAACCCCTCAATGATAACTAAAACTACATTCAGAGATAGCATTTCAGTCAATTCAGGTAATCAATCTCCAGTACTTGCTGGACCTCAGTTGTCCGAGTCTCCAAAATTCAGCAAAACTCAAAGGAAAAGTTTGGCTATTTCATCAAGTTATCTTGGAAGTTGGAACAATGTAGCGGAGAGTTCAACTTTCAGTACCAATGTGTTGAACAAACCATTTAAACAGGGTGAGGATGAACAATCCTCATTGCAGTCAAGCAAAGCTGAGTCCTTGGCAGCAAGCCTTCAGAAGGGACTACAGATTATTGACTATCATCAGCATAACTCAGCATTGAACAAATCTTCAACTTCCTTCTCCTTTGAGCACTTAACTTTGACACCTTGTCTAGATATTGACAGGGCTGAATCTTGTGACCAAACAATACTACAGAAAGCTTCCAGTGATGAAGTAGCTGCTTTCCTTTGTGGATCTTGCCGGAACAAAATATCTAATCTGGATTCCAGTGAGCACTTGCAGAATGTAATGGCAAAAAGCATCATGAAAGAGAAGGAGATCGAGAATGTTTGCAAGGGGCAAGCAGCTAGAATTGAGCAACTAAATCAGTTGGTGGAGAATTTGAAAGGGGAGAGAGAACTGGACACAATTACTTTGTATAACTCAATGAAAGATGAAGAAAAACTTCTAAGGGGATTTTCCTCAAATGGTCACTTGCCATGTATTATAGAGGAAAAATGTGAAATTAAAGAAGTGCAGGAAGAGTTAGCCCAAAGAGACGTCTCTTTTGATTCAACTGAGAAGGAGTCTCTTCTTAAGGAAATTCAGAATCTAAGGAGCAAGCTGCAATTATGTAGTGATGCACCAGTTAAAAAGTCTACTGACAAACTAAGGTCTTCTTTGATGTCAAGATCCATACAACTGAAAAATGGCGGAGTATTTTGTTATGATAATGGCAACGAAGAGCTAGAGAATGAAAGGCAGAGATGGACAGAAATGGAAAGTGAGTGGATTTGTCTTACTGATGAACTTAGAGCTGATCTTGAGTCATATCGCCAACGTACTGAGAGGTTGGAGATGGAACTGAATTCTGAGAAGAAGTGCACAGCAGAGATAGATGATGCGCTAAAGAGAGCAGTTATGGGACATGCTAGAATGGTGGAACACTATGCTGATCTACAAGAAAAATATGATGATTTGGTTGTGAAACATGATGCATTGATGGAAGGCATAGCAGAAGTGAAGAAGGCAGCAGCGAAAGCTTCAAAAAAAGGTCATGCACGCTTTGCCAAATCTCTTTCTGCTGAGCTTTCAGCATTGAGGGTGGAAAGAGAAAGGGAATCAAAATTATTGAAAAAGGAGAACCAGAACTTGAAGATTCAACTTGGAGATACTGCTGAAGCTGTTCAGGCCGCTGGAGAACTACTTGTTAGGCTAAGAGAGGCTGAACATGCAGCAGCTGTTGCAGAGGAGAACTTTACAAATATGCAGCAAGATAATGAAAATTTGAAGATGCAAATTGAGAAGCTGAAAAGAAAACACAAGACAGAGATTAATACCATGAAGCAGTACATTACAGATAGCAAATTACCTGAGTCTGCATTGCAACCACTGTATAGAGAGGATTCTGATGTGGGACACAATGCAGCTTCCTCCTATACATACGATGATCAGGCATGGAGAGCAGAATTTGGAGCAATATATCAGGAGCATTACTAG 3381 0.4108 MRQKTNNTDSSGFLGNISSNFLRSISSSNRKPTSSSFSNPKSPNSDAENTPPTHPNISLNHHHESKPYDPFSHSNSHVVVRIKPENINGKEGDWEIKKVSSDALRVGDIKFTFDEVFDTSSNQEDVFQSVGVPLVRNALAGYNTTILSFGQSGSGKTHTMWGPPSAMVDESLRSSQLGIVPRIFRMLFSELERERLTSDQKQFNYQCRCSFLEIYNEQISNLLNPIQQNLEMKDDSRNAPYIENLVEEYITNYDDVAQILIKGLSRRKKGVTSLNSNSSRSHIVFTFVIESLSKGTTKGFSSSSKTSRISLIDLAGQDWDEVGDGGSQCPKKSRHVEKSLSGLEHLVDALTNKSQSGKNEDMPHSDSCLTRLLQEPLGGNAKLSVICSISPDNKSNDGTLRTLRFGEQVRSVRNEPVINVIKETDVDLSTNVRHLKEELIRAKADVHSSAGSKDGYFQGHNVRESLNQMRVNLNRSLLLSNIDSDTDERVNVNEDDIQQLRQQIVELDSSSEGNPKDISVNENCGQFCSVEENCDADTTSGDEIEKSEVCCRKTLSNNPSMITKTTFRDSISVNSGNQSPVLAGPQLSESPKFSKTQRKSLAISSSYLGSWNNVAESSTFSTNVLNKPFKQGEDEQSSLQSSKAESLAASLQKGLQIIDYHQHNSALNKSSTSFSFEHLTLTPCLDIDRAESCDQTILQKASSDEVAAFLCGSCRNKISNLDSSEHLQNVMAKSIMKEKEIENVCKGQAARIEQLNQLVENLKGERELDTITLYNSMKDEEKLLRGFSSNGHLPCIIEEKCEIKEVQEELAQRDVSFDSTEKESLLKEIQNLRSKLQLCSDAPVKKSTDKLRSSLMSRSIQLKNGGVFCYDNGNEELENERQRWTEMESEWICLTDELRADLESYRQRTERLEMELNSEKKCTAEIDDALKRAVMGHARMVEHYADLQEKYDDLVVKHDALMEGIAEVKKAAAKASKKGHARFAKSLSAELSALRVERERESKLLKKENQNLKIQLGDTAEAVQAAGELLVRLREAEHAAAVAEENFTNMQQDNENLKMQIEKLKRKHKTEINTMKQYITDSKLPESALQPLYREDSDVGHNAASSYTYDDQAWRAEFGAIYQEHY 1126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01955 1126 MobiDBLite consensus disorder prediction 24 74 - -
Spst6g01955 1126 SMART kinesin_4 73 420 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst6g01955 1126 Coils Coil 745 765 - -
Spst6g01955 1126 PANTHER CENTROMERE PROTEIN E 74 1078 IPR027640 GO:0003777|GO:0007018
Spst6g01955 1126 Pfam Kinesin motor domain 98 412 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst6g01955 1126 Coils Coil 490 510 - -
Spst6g01955 1126 Coils Coil 895 922 - -
Spst6g01955 1126 MobiDBLite consensus disorder prediction 24 58 - -
Spst6g01955 1126 ProSiteProfiles Kinesin motor domain profile. 75 412 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst6g01955 1126 PRINTS Kinesin heavy chain signature 272 289 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst6g01955 1126 PRINTS Kinesin heavy chain signature 362 383 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst6g01955 1126 PRINTS Kinesin heavy chain signature 141 162 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst6g01955 1126 PRINTS Kinesin heavy chain signature 308 326 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst6g01955 1126 Coils Coil 822 842 - -
Spst6g01955 1126 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 77 444 IPR027417 -
Spst6g01955 1126 Coils Coil 870 890 - -
Spst6g01955 1126 Coils Coil 991 1015 - -
Spst6g01955 1126 Coils Coil 1026 1074 - -
Spst6g01955 1126 Gene3D Kinesin motor domain 70 422 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01955 Spst-Chr6 19134536 19140343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01955 113 438 Calmodulin-binding Proteins AT5G65930 32.424 7.79e-43 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01955 K10400 - gmx:100817066 1806.96