Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01950 ATGCCAAGTGTTAAGCCTGGTGCATCTGACAAAGACTCAGAACCATTTGTTGAAGTTGATCCAACTGGAAGATATGGCAGATACAGTGAACTGCTTGGATGTGGTGCTGTGAAAAAGGTGTACAGGGCATTTGATCAAGAAGAGGGGATAGAGGTGGCTTGGAACCAAGTGAAACTGAGGAACTTCAGTAATGACCCTGCAATGGTGGAAAGGCTTTACTCTGAGGTGAGATTGCTCAGAAGCTTAACCAACAAAAACATCATATCCCTTTACAATGTTTGCAGGGATGAGAAGCACAACACTTTAAATTTCATCACTGAGGTCTGCACCAGTGGGAATCTGAGGGAGTACAGGAAGAAGCACAAGCATGTGTCCATGAAGGCCTTGAAAAAGTGGTCCAAGCAGATTTTGGAAGGGTTGAATTACTTGCATTTGCATGACCCTTGTATCATCCACAGAGACCTCAACTGCAGTAATGTGTTTGTCAATGGGAACACTGGCCAGGTTAAGATTGGTGACCTGGGTTTGGCAGCAATTGTAGGGAAGAGCCACTCTGCACATTCAGTTCTTGGGACACCAGAATTTATGGCACCTGAGTTATATGATGAGGACTACACTGAAATGGTTGACATATACTCATTTGGAATGTGTGTGTTGGAGATGGTAACTCTAGAGATTCCTTATAGTGAATGTGACAATGTTGCCAAGATATACAAGAAGGTGTCATCAGGTGTGAGACCTCAAGCCTTGAGCAAGATCAGAGATCCTGAAGTGAAGGCCTTCATTGAGAGGTGTCTTGCGCAGCCAAGGGCTAGACCTTCTGCTGCAGAGTTGCTCAAGGATCCCTTCTTTGATTTGCTTGATTATGATGAAGAACATGATGATGATGATGAGTCTAATGCTTCATGA 909 0.44 MPSVKPGASDKDSEPFVEVDPTGRYGRYSELLGCGAVKKVYRAFDQEEGIEVAWNQVKLRNFSNDPAMVERLYSEVRLLRSLTNKNIISLYNVCRDEKHNTLNFITEVCTSGNLREYRKKHKHVSMKALKKWSKQILEGLNYLHLHDPCIIHRDLNCSNVFVNGNTGQVKIGDLGLAAIVGKSHSAHSVLGTPEFMAPELYDEDYTEMVDIYSFGMCVLEMVTLEIPYSECDNVAKIYKKVSSGVRPQALSKIRDPEVKAFIERCLAQPRARPSAAELLKDPFFDLLDYDEEHDDDDESNAS 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01950 302 Gene3D Phosphorylase Kinase; domain 1 10 107 - -
Spst6g01950 302 FunFam Probable serine/threonine-protein kinase WNK1 10 107 - -
Spst6g01950 302 PIRSF TyrPK_CSF1-R 26 130 - -
Spst6g01950 302 PIRSF TyrPK_CSF1-R 118 300 - -
Spst6g01950 302 ProSiteProfiles Protein kinase domain profile. 26 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g01950 302 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 11 285 - -
Spst6g01950 302 Gene3D Transferase(Phosphotransferase) domain 1 109 287 - -
Spst6g01950 302 CDD STKc_WNK 24 284 - -
Spst6g01950 302 Pfam Protein kinase domain 29 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g01950 302 FunFam probable serine/threonine-protein kinase WNK9 109 289 - -
Spst6g01950 302 SUPERFAMILY Protein kinase-like (PK-like) 20 285 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01950 Spst-Chr6 19060811 19061937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01950 10 285 MAP Kinase Kinase Kinase AT5G55560 84.058 0.0 502
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Spst6g01950 Pkinase 1.5e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01950 K08867 - gmx:100782039 545.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01950 6 19060811 19061937 Spst6g01950 6 19060811 19061937 ECH
Spst6g01950 6 19060811 19061937 Spst8g00945 8 8354141 8359512 PCT