Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01942 ATGAAAATATCAAAATCCAAGAGTTCCACCTCTAATTTGCCCCCAGGGCCATGGAAGCTTCCTCTCATAGGAAACTTACACCAACTTTTTGGCTCATCTCTGCCTCATCATGTTCTAAGAAACTTGGCCAGCAAGTATGGACCCTTGATGCACCTAAAACTAGGAGAGGTATCAAACATTATAGTTTCTTCACCAGAAATGGCCAAAGAGATTGTGAAAACACATGACATCATCTTTTCCAATAGGCCACAAATTCTGGTTTCCAAAATTGCTTACAATGCCAAGGACATTGCCTTCTCTCCCTATGGAAGCTATTGGAGGCAACTAAGAAAGATGTGCACAGAAGAGCTATTGGCCTCAAAGCGTGTGCAATGCTTCAGGTCCATAAGGGAAGAGGAGGTGTCAACATTCATTAAAGAAATATCTTCAAGAGAAGGGTTGGTTGTGAATATCAGTGAGAAGATTTACTCACTCACATACGGAATAACAGCTAGAGCAGCCATTGGTGAGAAGTGCATGCACCAGCAAGAGTTGATATCCTTGATTGAGGAAGCTATATACCTTGCTGGAGGACTTTGTGTTGCTGATCTCTATCCTTCCGTTACATGGCTTCAAATGTTCAGCGTGGTGAAGGCTAAATCTGAAAAATTGTTCAGAAAGACTGATGAGATATTGGACAAAATCATTGAAGATCACAAAACAAAGAAAAGAGGCCACTTGTATGAAACTGATCAAAAGGATTTGGTTGATATTCTATTAGACTATCAACAGCCAAACAACAACATTCCCCTGGACCATCCTTTGACTGATGAAAATGTTAAAGCAGTCATCCTGGATGTCTTTAGTGCTGGAACTGAAACATCATCAGCAGTTGTGGAATGGGCCATGTCAGAAATGGTGAGAAATCCAAAGGTGATGGAAAAGGCACAAGCTGAGGTGAGAAGGGTGTTTAACAGCAAAGGGTGTGTGGATGAGACACAATTGAACCAATTGACATACTTGAAATGTGTTATCAAAGAAACAATGAGGCTACACCCTCCTGCACCACTGTTGCTTCCTAGAGAGAGCAAGGAAAAATGTGAGATCAATGGATATGACATTCCTGCAAGGACAAGGGTCCTCATCAATGCTTGGGCTATTGGAAGAGATCCCAAGTATTGGACTGATGCTGAGACATTTAAGCCTGAGAGGTTTTTGGATAGCTCAATAGATTACAAAGGGACTAATTTTGAGTTTATTCCATTTGGTGCTGGAAGGAGGATGTGTCCTGGCATTGCATTTGCCATAGCTGACATTGAGTTGCCACTTGCTCAGTTGATTTACCATTTTGATTGGAGGCTGCCTATTGGAATCAAATATGAAGAACTTGACATGAGTGAATCCTACGGTTTAACTGCCAGAAGACCAAATGGACTCATGTCGCTTGACCTGTTTACAAGAAGAAGCTGTAGGGCAATAAATTTGGAGAATGTCCCTCAGTGA 1482 0.4163 MKISKSKSSTSNLPPGPWKLPLIGNLHQLFGSSLPHHVLRNLASKYGPLMHLKLGEVSNIIVSSPEMAKEIVKTHDIIFSNRPQILVSKIAYNAKDIAFSPYGSYWRQLRKMCTEELLASKRVQCFRSIREEEVSTFIKEISSREGLVVNISEKIYSLTYGITARAAIGEKCMHQQELISLIEEAIYLAGGLCVADLYPSVTWLQMFSVVKAKSEKLFRKTDEILDKIIEDHKTKKRGHLYETDQKDLVDILLDYQQPNNNIPLDHPLTDENVKAVILDVFSAGTETSSAVVEWAMSEMVRNPKVMEKAQAEVRRVFNSKGCVDETQLNQLTYLKCVIKETMRLHPPAPLLLPRESKEKCEINGYDIPARTRVLINAWAIGRDPKYWTDAETFKPERFLDSSIDYKGTNFEFIPFGAGRRMCPGIAFAIADIELPLAQLIYHFDWRLPIGIKYEELDMSESYGLTARRPNGLMSLDLFTRRSCRAINLENVPQ 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01942 493 PRINTS P450 superfamily signature 283 300 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01942 493 PRINTS P450 superfamily signature 336 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01942 493 PRINTS P450 superfamily signature 422 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01942 493 PRINTS P450 superfamily signature 413 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01942 493 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 415 424 IPR017972 GO:0005506|GO:0016705
Spst6g01942 493 Gene3D Cytochrome P450 6 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01942 493 PANTHER CYTOCHROME P450 71B11-RELATED 8 473 - -
Spst6g01942 493 PRINTS E-class P450 group I signature 376 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01942 493 PRINTS E-class P450 group I signature 272 289 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01942 493 PRINTS E-class P450 group I signature 67 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01942 493 PRINTS E-class P450 group I signature 335 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01942 493 PRINTS E-class P450 group I signature 412 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01942 493 PRINTS E-class P450 group I signature 292 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01942 493 PRINTS E-class P450 group I signature 43 62 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01942 493 PRINTS E-class P450 group I signature 422 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01942 493 CDD CYP71-like 45 472 - -
Spst6g01942 493 FunFam Cytochrome P450 71D8 6 475 - -
Spst6g01942 493 Pfam Cytochrome P450 14 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01942 493 SUPERFAMILY Cytochrome P450 14 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01942 Spst-Chr6 18891284 18893973 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01942 5 468 Cytochrome P450 AT3G48310 41.845 3.03e-134 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01942 - - qsu:111986207 603.208