Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01939 ATGTTCTGTTTCCACATGGATATTCAAACCCTCTACTTCTTATCCAGTGTCATTGTTATGTTCATTGCACTCAAAATATTGACAAAGAAATCTGCCTCAACTCCAAATTTACCGCCAGGGCCATGGAAGCTACCTATAATTGGGAACATACACAACCTTGTTGGCTCACTTCCCCATCGTAGACTGAGAGATTTATCAACAAAATATGGACCCTTGATGCATCTGAAGCTTGGAGAGGTTTCTACCATTGTGGTTTCATCCCCAGAGTATGCTAAAGAAGTGTTAAAAACCCATGATCTCATCTTTGCATCAAGGCCTCCAATACTAGCTTCAAAGATAATGTCTTATGATTCTATGGGCATAGCTTTTGCTCCTTATGGTGGTTATTGGAGACAGCTAAGGAAGATTTGTGCATTGGAGCTATTAAGCTCAAAACGTGTCCAATCTTTCCAGCCAATAAGAGAGGAAGAGCTTACTAACTTCATAAAAAACATTGCTTCAAACGAAGGGTCACCCATAAATTTCACCCAAGAAGTGCTTGCAACAATATCTACAATTGTTTCAAGGACAGCCCTTGGAAGAAAGTGTAGGGACCATAAAAAGTTCATATCAGCTGTAACGGAAGCCACAAAGATTGCTGGAGGTTTTGACTTGGGAGATTTATACCCTTCTGCTAAATGGCTTCAGCACATCTCAGGGTTGAAGCCTAGGCTTGAGAAGTATCATCAACAAACTGACAGGATAATGCAAAGCATCCTCAATGAGCATAGAGAGGCTAAGTCGAGTGCTGCTCAAGGCCGTGGTGAAGAAGTGGAGGATGATCTTGTAGATGTGCTCATGAAGGAGGAGTTTGGCTTAAGTGACAATAGTATCAAGGCTGTGATTATGGTAAGAGTATTTACATCATCCATAAATTTTATTTGCATAGATATCTATGGAGGGGGATCAGAGACATCATCCACTACCATAACATGGGCAATGGCAGAGATGATAAAAGATCCAAGAATAATGAAGAAGGTACAAGCTGAGGTAAGAGAGGTGTTTGGTAAGAAAGGACACCTTAATGAAAGTGACATGGATAATCTAAAATATTTGAAATGTGTTGTGAAAGAGACATTGAGACTGCACCCTCCTGGTCCCCTTCTACTTCCAAGAGAGTGTGGACAAGCTTGTGAAATAAAAGGGTATCACATACCAACCAAAAGCAAGGTCATTGTCAATGCTTGGGCTATTGGAAGAGATCCAGATCATTGGCCTGAGGCTGAGAGGTTTTATCCTGAGAGGTTCATTGAAAGTGGTGTTGACTACAAAGGCAATAATTTTGAGTATATTCCATTTGGTGCGGGAAGAAGAATATGCCCTGGCCTCACATTTGGCTTGACCACTGTTGAGTTTCCTCTTGCATTGTTGATGTACCATTTTGATTGGAAAGTTCCCAATGGAATCAAGAAGGAAGATTTGGATATGACTGAGGCTTTTGGAATATCAGTTGGTAGAAAACATGATTTGCTGCTAATTCCTTTCACTTTCCATCCATGA 1539 0.4074 MFCFHMDIQTLYFLSSVIVMFIALKILTKKSASTPNLPPGPWKLPIIGNIHNLVGSLPHRRLRDLSTKYGPLMHLKLGEVSTIVVSSPEYAKEVLKTHDLIFASRPPILASKIMSYDSMGIAFAPYGGYWRQLRKICALELLSSKRVQSFQPIREEELTNFIKNIASNEGSPINFTQEVLATISTIVSRTALGRKCRDHKKFISAVTEATKIAGGFDLGDLYPSAKWLQHISGLKPRLEKYHQQTDRIMQSILNEHREAKSSAAQGRGEEVEDDLVDVLMKEEFGLSDNSIKAVIMVRVFTSSINFICIDIYGGGSETSSTTITWAMAEMIKDPRIMKKVQAEVREVFGKKGHLNESDMDNLKYLKCVVKETLRLHPPGPLLLPRECGQACEIKGYHIPTKSKVIVNAWAIGRDPDHWPEAERFYPERFIESGVDYKGNNFEYIPFGAGRRICPGLTFGLTTVEFPLALLMYHFDWKVPNGIKKEDLDMTEAFGISVGRKHDLLLIPFTFHP 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01939 512 PANTHER CYTOCHROME P450 71B11-RELATED 22 507 - -
Spst6g01939 512 FunFam Cytochrome P450 71D8 30 507 - -
Spst6g01939 512 SUPERFAMILY Cytochrome P450 38 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01939 512 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01939 512 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01939 512 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01939 512 Pfam Cytochrome P450 38 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01939 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Spst6g01939 512 Gene3D Cytochrome P450 30 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01939 512 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01939 512 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01939 512 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01939 512 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01939 512 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01939 512 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01939 512 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01939 512 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01939 512 CDD CYP71-like 68 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01939 Spst-Chr6 18874347 18876169 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01939 8 510 Cytochrome P450 AT3G26300 42.023 1.01e-140 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01939 - K13267 gmx:100813216 830.476