Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01938 ATGGCTCTTATATTCCTCTACATAGCTCTTATTTCGTTAGTCTTCACAACCCTTATTATGAAACCCAAGAAAACTGATGACACAACTTCTAAAATACCCCATGGGCCTAGAAAGCTACCTATTATTGGAAATATATACAATCTGCTAAGCTCTCAACCCCATAGAAAATTAAGAGATTTGGCCTTAAAATATGGACCAGTGATGCATCTTCAACTTGGAGAGGTTTCTACTATTGTCATTTCATCCCCTGAGTGTGCTATGGAAGTGATGAAGACTCATGATATTAACTTTGCCACAAGGCCTAAAGTCTTAGCTATTGATATATTGTCTTATAATTCCACAAGTATAGCTTTTGCTCCTTATGGCAATTATTGGAGGCAGCTAAGAAAAATTTGCACATTGGAGCTTTTAAGCCTAAAACGTGTCAACTCATACCAGCCAATTAGAGAAGAGGTGCTCTCCAATCTTGTCAAATGGATTCATTCAGAGAAAGGATCCCCCTTCAACCTCACTCAAGCTGTACTTTCATCAATTTATACAATTGCTTCTAGGTCTGCCTTTGGCAAGAAATGCAAAGACCAAGAAAAATTTATATCAGTGATTAGAAAAACCACAAAACTTTCAGCAGGTTTTGATATAGGAGAATTCTTTCCTTCTTCTACATGGCTTCAACTTGTCACTGGCTTGAGACCTAAGCTTGAGAGGTCTCATCAACAAGTTGATCAGATAATGGAAAACATCATCCATGAGCATAAAGAGGCAAAGTCAAAAGCCAAAGATGACCAAAGTGAAGCAGAAGAAGATCTTGTGGATGTTCTCATGCAATATGAGGATGGTAGCAAGCAGGATTTTTTCTTAACTAGAAACAACATCAAGGCCATAATTCTGGACATTTTTGCTGCTGGAGGTGAGACATCAGCAACAGCCATAGATTGGGCAATGGCTGAAATGGTAAAGCATCCAAGAATAATGAAGAAAGCACAATCTGAACTGAGAGAGGTATTCGGTGAGAAAGGGAGGGTAGATGAAAATTCCATCAATGAACTCAAATATTTGAAACTAGTAGTCAAAGAAACCTTGAGGCTGCACCCTCCAACTCCTCTTTTGCTTCCAAGGGAATGTGGTCAAGCATGTGAGATACATGGTTATCACATACCTGCCAAAAGCAAGGTCATAATCAATGCTTGGACAATTGGAAGAGATCCAAACTATTGGACTGAGCCAGAGAGGTTTTATCCTGAGAGATTCATTGATAGCACTATTGACTATAAAGGGAATAATTTTGAGTTCATTCCTTTTGGTGCTGGAAGAAGGATATGCCCAGGCAGCACATTTGCTTTGAGAGCTATTGAACTGACCCTTGCAATGTTGTTGTATCACTTTGACTGGAAACTTCCCAGTGGAATCAGAAGTGAAGAATTGAACATGAGTGAGGTGTTTGGACTCACAGTTAGAAGAAAATATGATCTGTTCTTGGTCCCTTTCCCTTATCATCCTTTGCCTGTCACGTGA 1512 0.3929 MALIFLYIALISLVFTTLIMKPKKTDDTTSKIPHGPRKLPIIGNIYNLLSSQPHRKLRDLALKYGPVMHLQLGEVSTIVISSPECAMEVMKTHDINFATRPKVLAIDILSYNSTSIAFAPYGNYWRQLRKICTLELLSLKRVNSYQPIREEVLSNLVKWIHSEKGSPFNLTQAVLSSIYTIASRSAFGKKCKDQEKFISVIRKTTKLSAGFDIGEFFPSSTWLQLVTGLRPKLERSHQQVDQIMENIIHEHKEAKSKAKDDQSEAEEDLVDVLMQYEDGSKQDFFLTRNNIKAIILDIFAAGGETSATAIDWAMAEMVKHPRIMKKAQSELREVFGEKGRVDENSINELKYLKLVVKETLRLHPPTPLLLPRECGQACEIHGYHIPAKSKVIINAWTIGRDPNYWTEPERFYPERFIDSTIDYKGNNFEFIPFGAGRRICPGSTFALRAIELTLAMLLYHFDWKLPSGIRSEELNMSEVFGLTVRRKYDLFLVPFPYHPLPVT 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01938 503 Coils Coil 248 268 - -
Spst6g01938 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Spst6g01938 503 Pfam Cytochrome P450 33 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01938 503 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01938 503 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01938 503 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01938 503 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01938 503 PANTHER OS08G0105600 PROTEIN 56 499 - -
Spst6g01938 503 FunFam Cytochrome P450 71D8 25 494 - -
Spst6g01938 503 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01938 503 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01938 503 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01938 503 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01938 503 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01938 503 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01938 503 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01938 503 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01938 503 SUPERFAMILY Cytochrome P450 33 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01938 503 CDD CYP71-like 63 490 - -
Spst6g01938 503 Gene3D Cytochrome P450 25 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01938 Spst-Chr6 18870310 18872968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01938 1 494 Cytochrome P450 AT3G26310 41.750 4.03e-138 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01938 - - gmx:100808862 848.966