Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01865 ATGGGTGCCAGACGCCAACGGGGGTGGCCAAAACCCAGAGGATGGGTTAAGGGAAAACTGGTTGGATGTGGATCATTCGGCACTGTCCATTTGGCGATGAACAAATCCACCGGTGGCCTTTTTGTGGTCAAATCATCACATTCCGGGGTTGGACGCGAGGCTTTGGATAAAGAGGTGAAAATCCTCAACACGTTTAATTCTTCTCCATACATTGTTCAATGTTTGGGGACAGAGGAGGAACAAGGCAAACTGAATGTGTTTATGGAGTACATGGCAGGAGGTAGTTTGGCAGATGTGGCACACAAGTTCGGTGGGTCATTGGATGAAGAGGTGGTTCGTGTTTATACCAGGGAAATTCTTCACGGCCTAAACCATCTTCACCAGCATGGAATTGTGCACTGCGATCTCAAGTGCAGGAACGTGCTTCTGGGTCCCTCTGGCAACGTCAAGCTGGCAGACTTTGGATGTGCGAAAAGGGTATCGGACTTGTCAAAGTCCAGTGGTGGGACTCCTCTGTGGATGGCTCCTGAAGTGCTGAGGAACGAGTCTGTGGATTTTGGTGCGGATATATGGTCCTTGGGATGTACTGTTATCGAGATGGCCACTGGCACTCCTCCTTGGGCTCATGATGTTTCAAACCCCGTCAGTGCTGTGCTGAAGATTGCCCATGGTGATGCTATACCTCCGTTTCCACCCCATTTCTCTAAGGAGGGCTTGGATTTCTTGAGCAAGTGCTTGCAGAGAGACCCCAGTAAGAGGTCTACTGCTGAGCAGTTACTTAACCATCCCTTTGTTACCTCAACACCTTCTCACCAACGTAATGCTTCCTCACCCGCAAGTGTCTTGGATGTTCATAATTTCAAAGACACCTGTGATATTGATGAATTCGAAACTTCCGAGGGGAATGATTTCTCAATCACAAACACATTTGCATCTTACAACAGTGACGACCCCAAAGGAGTTGCAGTATGTAAAGTGGAAGACAGTGCTTTGGGCTCATCAGGGAATTGGATTACTGTTAGAACATGCTGA 1032 0.4826 MGARRQRGWPKPRGWVKGKLVGCGSFGTVHLAMNKSTGGLFVVKSSHSGVGREALDKEVKILNTFNSSPYIVQCLGTEEEQGKLNVFMEYMAGGSLADVAHKFGGSLDEEVVRVYTREILHGLNHLHQHGIVHCDLKCRNVLLGPSGNVKLADFGCAKRVSDLSKSSGGTPLWMAPEVLRNESVDFGADIWSLGCTVIEMATGTPPWAHDVSNPVSAVLKIAHGDAIPPFPPHFSKEGLDFLSKCLQRDPSKRSTAEQLLNHPFVTSTPSHQRNASSPASVLDVHNFKDTCDIDEFETSEGNDFSITNTFASYNSDDPKGVAVCKVEDSALGSSGNWITVRTC 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01865 343 ProSiteProfiles Protein kinase domain profile. 15 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g01865 343 CDD STKc_MAPKKK 15 265 - -
Spst6g01865 343 SMART serkin_6 15 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g01865 343 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Spst6g01865 343 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 15 295 - -
Spst6g01865 343 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Spst6g01865 343 Pfam Protein kinase domain 17 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g01865 343 Gene3D Transferase(Phosphotransferase) domain 1 13 323 - -
Spst6g01865 343 FunFam MAP kinase kinase kinase18 10 310 - -
Spst6g01865 343 SUPERFAMILY Protein kinase-like (PK-like) 11 309 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01865 Spst-Chr6 17701858 17702889 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01865 8 266 MAP Kinase Kinase Kinase AT3G06030 44.840 7.62e-72 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Spst6g01865 Pkinase 4.1e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01865 K20716 - gmx:100804518 513.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01865 6 17701858 17702889 Spst6g01865 6 17701858 17702889 ECH