Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01862 ATGGTTGATCCGGTGAAGATGAAGGAGGAAGCGGTGAGGGGACGAAGGGGATCAGCTAACCCTAAATGTAATGGATGTGAATGTGAATTGGGGGAGAAGGAGAGGGATAGAGAGAGAGATGGGAAGAGGAGAAAGAAAGGGAGAAAGGAGAGGAGCGGAGGCACTTCAAATCACAAATTGTTGGGTTTGAAATTGCCGGTGGGTGTTATGGGTTGTATATGCTCCAAAGCAAAATCCCCAGTCGAATACACTAATCAAAGCCATTCCAAAGATTTGAAGGCCGAAGCGTCCTCCAACACCAACCATTTCGGAGACACTACTAGCCTCGTATCCAATGCAAATGATAAATCAAATTCAAATGCAACTGAAGAAGATGCCGTCACCCCAACTTATTTGAATCAACTTCAACAACTTAAAGGGGACAAGAATGCCAATGGGAATGGGGTGGGATCAACCACAAAAGCACAACAACCTAAGATTTGTAGGGTGTATAGTGTGACCAGAGGGGAAAGAGGAGTACAGGTTCTTGCAGGTTGGCCCTCTTGGCTCACGGCAGTTGCTGGTGAAGCCATTAGTGGTTGGATTCCTCGCAGGGCTGATTCTTTTGAGAAGTTGGATAAGGCAAGAACTTACAGCAGTGTTTATAAAGCTCGTGACCTTGAAACAAATAAAATTGTTGCATTGAAGAAGGTCCGATTTGCTAATATGGATCCAGAAAGTGTTCGTTTTATGTCAAGGGAAATAATTGTGCTGCGTAGGCTTGATCATCCTAATGTCATGAAGCTTGAGGGCATGATTACTTCAACGGTCTCTGGTAGCTTGTACCTTGTCTTCGAATATATGGACCATGATCTTGCAGGCCTTGCAGCAATACCTGACGTCAGGTTTACCGAAGCACAGAAGCCAGATACGGAATGGATTGCTAAATGTCTGTTTATAACAAAAGCACCATTTTTTTTGTTGTTGAATTTTGATGAGTCCAAAGCACTGTATCTGCTGGAGTCCTAG 1008 0.4415 MVDPVKMKEEAVRGRRGSANPKCNGCECELGEKERDRERDGKRRKKGRKERSGGTSNHKLLGLKLPVGVMGCICSKAKSPVEYTNQSHSKDLKAEASSNTNHFGDTTSLVSNANDKSNSNATEEDAVTPTYLNQLQQLKGDKNANGNGVGSTTKAQQPKICRVYSVTRGERGVQVLAGWPSWLTAVAGEAISGWIPRRADSFEKLDKARTYSSVYKARDLETNKIVALKKVRFANMDPESVRFMSREIIVLRRLDHPNVMKLEGMITSTVSGSLYLVFEYMDHDLAGLAAIPDVRFTEAQKPDTEWIAKCLFITKAPFFLLLNFDESKALYLLES 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01862 335 PANTHER CELL DIVISION PROTEIN KINASE 200 296 - -
Spst6g01862 335 MobiDBLite consensus disorder prediction 1 59 - -
Spst6g01862 335 ProSiteProfiles Protein kinase domain profile. 200 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g01862 335 Gene3D Phosphorylase Kinase; domain 1 199 293 - -
Spst6g01862 335 MobiDBLite consensus disorder prediction 85 128 - -
Spst6g01862 335 SUPERFAMILY Protein kinase-like (PK-like) 210 298 IPR011009 -
Spst6g01862 335 MobiDBLite consensus disorder prediction 27 43 - -
Spst6g01862 335 MobiDBLite consensus disorder prediction 1 16 - -
Spst6g01862 335 FunFam probable serine/threonine-protein kinase At1g54610 189 282 - -
Spst6g01862 335 Pfam Protein kinase domain 210 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01862 Spst-Chr6 17678109 17680807 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01862 194 300 Core Cell Cycle Gene Families AT5G10270 42.857 1.32e-20 90.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Spst6g01862 Pkinase 5e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01862 - - gmx:100805055 306.99