Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst6g01849 | ATGGGAGAGGATTCGCCGAAAAATAAAGTAAAATTCCTCTGCAGCTACGCCGGCAAGGTCCTCCCACGACCCTCCGATGGCCTCCTCAGGTATGTCGGGGGCGAGACTCGGGTGGTTTCAGTCCCTCGCGACGTCACATTCTCCGAGCTGATGAAGAAGGTGAGCGGGATGGTGGAGGGGGAGGTGGTGCTAAAGTACCAGCTGCTCCCGGAAGATCTGGACGCGTTGGTGTCAGTTAGGACGCAGGAAGATGTGAAGCACATGATCCAGGAGCTGGATCGTCACCACACCGGAATGCTCCGTGCATTCCTCTTCCCCACTTCAAAGACGCCTTTGCTTGCGTCGGAACCCTATCTCTTGGAGCAACGCTACATCGACGCCGTAAATGGGATCATCCGAACAAGCCCTAAGGCAGCCAAGGGCTCTGCATGTTCATCCCCAAAATCATCGTCACCGGATGCAGGGGATCTGTACTCGCCTAGGTACTCCCCTAGTTTTGGGAATTTCAAATCGAATGCGAATGCCATGCAGAGAGTGCAAAGCTCTCCCAGCCTCACCAGCATTGGTGGCTTCGATCAGCAAGGTCATTATCACCAGCATCCCCATCTCCCATTTCACAACTATCCATCTTCCTCAACGTTAACTTCTAGACCGCCCCACGATCCTCAACTGGGAAGGCTTGGTGGAAGGGGTGCCTCCTTTAACTATCACTACTCAAACACCAGACAACCCCACAGAGGAGGAGGAGGAGGCTACGCCTACCATGATGACTCTGCGACCTATGTGAATGGCCATGTTCCCATTCAAAGTATGCCCAGAAGTCCTAGAAGAAAATCTGTATGGGACTAG | 849 | 0.5347 | MGEDSPKNKVKFLCSYAGKVLPRPSDGLLRYVGGETRVVSVPRDVTFSELMKKVSGMVEGEVVLKYQLLPEDLDALVSVRTQEDVKHMIQELDRHHTGMLRAFLFPTSKTPLLASEPYLLEQRYIDAVNGIIRTSPKAAKGSACSSPKSSSPDAGDLYSPRYSPSFGNFKSNANAMQRVQSSPSLTSIGGFDQQGHYHQHPHLPFHNYPSSSTLTSRPPHDPQLGRLGGRGASFNYHYSNTRQPHRGGGGGYAYHDDSATYVNGHVPIQSMPRSPRRKSVWD | 282 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst6g01849 | 282 | Gene3D | - | 30 | 106 | - | - | |
Spst6g01849 | 282 | MobiDBLite | consensus disorder prediction | 177 | 233 | - | - | |
Spst6g01849 | 282 | PANTHER | OS05G0427100 PROTEIN-RELATED | 4 | 216 | - | - | |
Spst6g01849 | 282 | Pfam | PB1 domain | 29 | 106 | IPR000270 | GO:0005515 | |
Spst6g01849 | 282 | SMART | PB1_new | 24 | 107 | IPR000270 | GO:0005515 | |
Spst6g01849 | 282 | MobiDBLite | consensus disorder prediction | 139 | 153 | - | - | |
Spst6g01849 | 282 | SUPERFAMILY | CAD & PB1 domains | 25 | 113 | - | - | |
Spst6g01849 | 282 | MobiDBLite | consensus disorder prediction | 136 | 159 | - | - | |
Spst6g01849 | 282 | MobiDBLite | consensus disorder prediction | 177 | 193 | - | - | |
Spst6g01849 | 282 | MobiDBLite | consensus disorder prediction | 205 | 219 | - | - | |
Spst6g01849 | 282 | CDD | PB1_UP2 | 13 | 105 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst6g01849 | Spst-Chr6 | 17624169 | 17625093 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst6g01849 | 3 | 156 | MAP Kinase Kinase Kinase | AT3G46920 | 43.713 | 1.46e-35 | 133 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst6g01849 | - | - | vun:114186951 | 397.512 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Spst6g01849 | 6 | 17624169 | 17625093 | Spst6g01849 | 6 | 17624169 | 17625093 | ECH |