Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01849 ATGGGAGAGGATTCGCCGAAAAATAAAGTAAAATTCCTCTGCAGCTACGCCGGCAAGGTCCTCCCACGACCCTCCGATGGCCTCCTCAGGTATGTCGGGGGCGAGACTCGGGTGGTTTCAGTCCCTCGCGACGTCACATTCTCCGAGCTGATGAAGAAGGTGAGCGGGATGGTGGAGGGGGAGGTGGTGCTAAAGTACCAGCTGCTCCCGGAAGATCTGGACGCGTTGGTGTCAGTTAGGACGCAGGAAGATGTGAAGCACATGATCCAGGAGCTGGATCGTCACCACACCGGAATGCTCCGTGCATTCCTCTTCCCCACTTCAAAGACGCCTTTGCTTGCGTCGGAACCCTATCTCTTGGAGCAACGCTACATCGACGCCGTAAATGGGATCATCCGAACAAGCCCTAAGGCAGCCAAGGGCTCTGCATGTTCATCCCCAAAATCATCGTCACCGGATGCAGGGGATCTGTACTCGCCTAGGTACTCCCCTAGTTTTGGGAATTTCAAATCGAATGCGAATGCCATGCAGAGAGTGCAAAGCTCTCCCAGCCTCACCAGCATTGGTGGCTTCGATCAGCAAGGTCATTATCACCAGCATCCCCATCTCCCATTTCACAACTATCCATCTTCCTCAACGTTAACTTCTAGACCGCCCCACGATCCTCAACTGGGAAGGCTTGGTGGAAGGGGTGCCTCCTTTAACTATCACTACTCAAACACCAGACAACCCCACAGAGGAGGAGGAGGAGGCTACGCCTACCATGATGACTCTGCGACCTATGTGAATGGCCATGTTCCCATTCAAAGTATGCCCAGAAGTCCTAGAAGAAAATCTGTATGGGACTAG 849 0.5347 MGEDSPKNKVKFLCSYAGKVLPRPSDGLLRYVGGETRVVSVPRDVTFSELMKKVSGMVEGEVVLKYQLLPEDLDALVSVRTQEDVKHMIQELDRHHTGMLRAFLFPTSKTPLLASEPYLLEQRYIDAVNGIIRTSPKAAKGSACSSPKSSSPDAGDLYSPRYSPSFGNFKSNANAMQRVQSSPSLTSIGGFDQQGHYHQHPHLPFHNYPSSSTLTSRPPHDPQLGRLGGRGASFNYHYSNTRQPHRGGGGGYAYHDDSATYVNGHVPIQSMPRSPRRKSVWD 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01849 282 Gene3D - 30 106 - -
Spst6g01849 282 MobiDBLite consensus disorder prediction 177 233 - -
Spst6g01849 282 PANTHER OS05G0427100 PROTEIN-RELATED 4 216 - -
Spst6g01849 282 Pfam PB1 domain 29 106 IPR000270 GO:0005515
Spst6g01849 282 SMART PB1_new 24 107 IPR000270 GO:0005515
Spst6g01849 282 MobiDBLite consensus disorder prediction 139 153 - -
Spst6g01849 282 SUPERFAMILY CAD & PB1 domains 25 113 - -
Spst6g01849 282 MobiDBLite consensus disorder prediction 136 159 - -
Spst6g01849 282 MobiDBLite consensus disorder prediction 177 193 - -
Spst6g01849 282 MobiDBLite consensus disorder prediction 205 219 - -
Spst6g01849 282 CDD PB1_UP2 13 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01849 Spst-Chr6 17624169 17625093 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01849 3 156 MAP Kinase Kinase Kinase AT3G46920 43.713 1.46e-35 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01849 - - vun:114186951 397.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01849 6 17624169 17625093 Spst6g01849 6 17624169 17625093 ECH