Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst6g01832 | ATGGAACTATCAGATTTGCAAAACAACAAGCAGAGCAGCAGCAACACAAACAACAGCGCCAACACAAAAACAAACACGGGTGGTGGTGGTGGTGGTGGTGGTGGTGGAAGTGCTGCAACTACTAATCCTCATGCTCACCATCATCACCACCAGCAATCAACTTCGCATCTCGTGGTCCCTTTTGATGCCAGGCCAAACCCTCCATCCCCCTTCATCTCTTCCTCCACATCTTCTTCCAATTCTTCATCCTCTTCCTCCTCCGCCGCCTCCGCCTCTTCCCACCTCATCGACGCCTCCCTAGCCATCGCCACCAGATCTGATGATTCTGCCAAGAAGACCCAACAACTTTCCACCACCGCCGCCGCCGCCTCCCCCGCCACCAACCCACCCAAGCGATCCACCAAGGACAGGCACACCAAAGTCGACGGCCGCGGCCGCAGAATTCGAATGCCCGCCACCTGCGCCGCTAGGGTTTTCCAATTGACCAGAGAATTGGGCCACAAGTCCGACGGCGAGACCATCGAGTGGCTCCTCCAGCAGGCCGAGCCTGCCATCATCGCCGCCACCGGAACCGGCACCATCCCCGCCAATTTCTCCACCCTCAACGTCTCCCTCCGCAGCAGCGGCTCCACGCTATCGGCGCCGCCATCCAAGTCCGCCCCGCACACCTTTCACGGCGCGCTTGCACTCGCTCATCACCCTTACGAGGAAGCCTTTCAACACACCGCTTTACTAGGCTTCCACCCTCATGCTCACCAGCACCATCAACAGCACCAACTTCTCTCCGCCGATCAAATCGCGGAAGCGCTTCCCAGCGGTGGCGCTGACTCCGGCGACAGCTATCTCAGGAAACGCTACCGAGAAGATCTGTTCAAAGATGATGACATTAACACCCAATCGCAGAACGAGAGCGGTGACGGCTCTTCGCCTAAAACTCCCAACCTACAGCTTCCGAAGCAGCAGCAGCAAACCGAAGCTGGTTCTGGGCTTCTCAGGCCCGCGAATTTGCTACCCGCGACAGCGATGTGGGCCGTGGCGCCCGCTCCCGCAAGTGGGCCTCCAGGCAGCACAATTTGGATGCTTCCAGTAACCTCGGCTTCTTCTTCTGCTTCTGCTGCAGCTTCCGCTTCTACTTCTTCTGGTGGTGGTGGTGGTGGATCCTCGGCGAGTTTGGAGAGTCAGATGTGGTCTTTCTCGCAGAGTGGTTTCATGCCAAGATTCAATCTTCCGAGTGCGCTTGAATTCCAAGGCGCACGTGGGGGTTCTCTGCAATTGGGGTCCATGCTAATGCCGCAGCAACCTTCTCAGCATCTGGGTCTCGCCATGTCTGACTCCAACTTGGGCATGTTGGCTGCCCTTAATGCTTACACTAGGGCTGGTTTCAATATTAATTCTGACAATCATCATCCCCATCCCCATCACCACCACCACCATCATCATCATCCCTTGGAGCATCAACATCAACATCAATCTCAACCTAGTGAGAGTGGAGAAGATGCTCCTAATAGCTCCCAATGA | 1518 | 0.5632 | MELSDLQNNKQSSSNTNNSANTKTNTGGGGGGGGGGSAATTNPHAHHHHHQQSTSHLVVPFDARPNPPSPFISSSTSSSNSSSSSSSAASASSHLIDASLAIATRSDDSAKKTQQLSTTAAAASPATNPPKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSSGSTLSAPPSKSAPHTFHGALALAHHPYEEAFQHTALLGFHPHAHQHHQQHQLLSADQIAEALPSGGADSGDSYLRKRYREDLFKDDDINTQSQNESGDGSSPKTPNLQLPKQQQQTEAGSGLLRPANLLPATAMWAVAPAPASGPPGSTIWMLPVTSASSSASAAASASTSSGGGGGGSSASLESQMWSFSQSGFMPRFNLPSALEFQGARGGSLQLGSMLMPQQPSQHLGLAMSDSNLGMLAALNAYTRAGFNINSDNHHPHPHHHHHHHHHPLEHQHQHQSQPSESGEDAPNSSQ | 505 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst6g01832 | 505 | MobiDBLite | consensus disorder prediction | 106 | 130 | - | - | |
Spst6g01832 | 505 | MobiDBLite | consensus disorder prediction | 462 | 505 | - | - | |
Spst6g01832 | 505 | MobiDBLite | consensus disorder prediction | 131 | 146 | - | - | |
Spst6g01832 | 505 | MobiDBLite | consensus disorder prediction | 68 | 88 | - | - | |
Spst6g01832 | 505 | MobiDBLite | consensus disorder prediction | 297 | 326 | - | - | |
Spst6g01832 | 505 | MobiDBLite | consensus disorder prediction | 1 | 88 | - | - | |
Spst6g01832 | 505 | MobiDBLite | consensus disorder prediction | 469 | 485 | - | - | |
Spst6g01832 | 505 | MobiDBLite | consensus disorder prediction | 106 | 146 | - | - | |
Spst6g01832 | 505 | ProSiteProfiles | TCP domain profile. | 134 | 188 | IPR017887 | - | |
Spst6g01832 | 505 | MobiDBLite | consensus disorder prediction | 292 | 326 | - | - | |
Spst6g01832 | 505 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
Spst6g01832 | 505 | PANTHER | TRANSCRIPTION FACTOR TCP4-RELATED | 46 | 450 | IPR005333 | GO:0003700 | |
Spst6g01832 | 505 | Pfam | TCP family transcription factor | 133 | 259 | IPR017887 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst6g01832 | Spst-Chr6 | 17489418 | 17490935 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst6g01832 | 131 | 446 | TCP Transcription Factor Family | AT1G35560 | 49.057 | 6.52e-69 | 223 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | TCP | Spst6g01832 | TCP | 3.1e-38 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst6g01832 | - | - | ccaj:109804339 | 596.66 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Spst6g01832 | 6 | 17489418 | 17490935 | Spst6g01832 | 6 | 17489418 | 17490935 | ECH |