Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01832 ATGGAACTATCAGATTTGCAAAACAACAAGCAGAGCAGCAGCAACACAAACAACAGCGCCAACACAAAAACAAACACGGGTGGTGGTGGTGGTGGTGGTGGTGGTGGAAGTGCTGCAACTACTAATCCTCATGCTCACCATCATCACCACCAGCAATCAACTTCGCATCTCGTGGTCCCTTTTGATGCCAGGCCAAACCCTCCATCCCCCTTCATCTCTTCCTCCACATCTTCTTCCAATTCTTCATCCTCTTCCTCCTCCGCCGCCTCCGCCTCTTCCCACCTCATCGACGCCTCCCTAGCCATCGCCACCAGATCTGATGATTCTGCCAAGAAGACCCAACAACTTTCCACCACCGCCGCCGCCGCCTCCCCCGCCACCAACCCACCCAAGCGATCCACCAAGGACAGGCACACCAAAGTCGACGGCCGCGGCCGCAGAATTCGAATGCCCGCCACCTGCGCCGCTAGGGTTTTCCAATTGACCAGAGAATTGGGCCACAAGTCCGACGGCGAGACCATCGAGTGGCTCCTCCAGCAGGCCGAGCCTGCCATCATCGCCGCCACCGGAACCGGCACCATCCCCGCCAATTTCTCCACCCTCAACGTCTCCCTCCGCAGCAGCGGCTCCACGCTATCGGCGCCGCCATCCAAGTCCGCCCCGCACACCTTTCACGGCGCGCTTGCACTCGCTCATCACCCTTACGAGGAAGCCTTTCAACACACCGCTTTACTAGGCTTCCACCCTCATGCTCACCAGCACCATCAACAGCACCAACTTCTCTCCGCCGATCAAATCGCGGAAGCGCTTCCCAGCGGTGGCGCTGACTCCGGCGACAGCTATCTCAGGAAACGCTACCGAGAAGATCTGTTCAAAGATGATGACATTAACACCCAATCGCAGAACGAGAGCGGTGACGGCTCTTCGCCTAAAACTCCCAACCTACAGCTTCCGAAGCAGCAGCAGCAAACCGAAGCTGGTTCTGGGCTTCTCAGGCCCGCGAATTTGCTACCCGCGACAGCGATGTGGGCCGTGGCGCCCGCTCCCGCAAGTGGGCCTCCAGGCAGCACAATTTGGATGCTTCCAGTAACCTCGGCTTCTTCTTCTGCTTCTGCTGCAGCTTCCGCTTCTACTTCTTCTGGTGGTGGTGGTGGTGGATCCTCGGCGAGTTTGGAGAGTCAGATGTGGTCTTTCTCGCAGAGTGGTTTCATGCCAAGATTCAATCTTCCGAGTGCGCTTGAATTCCAAGGCGCACGTGGGGGTTCTCTGCAATTGGGGTCCATGCTAATGCCGCAGCAACCTTCTCAGCATCTGGGTCTCGCCATGTCTGACTCCAACTTGGGCATGTTGGCTGCCCTTAATGCTTACACTAGGGCTGGTTTCAATATTAATTCTGACAATCATCATCCCCATCCCCATCACCACCACCACCATCATCATCATCCCTTGGAGCATCAACATCAACATCAATCTCAACCTAGTGAGAGTGGAGAAGATGCTCCTAATAGCTCCCAATGA 1518 0.5632 MELSDLQNNKQSSSNTNNSANTKTNTGGGGGGGGGGSAATTNPHAHHHHHQQSTSHLVVPFDARPNPPSPFISSSTSSSNSSSSSSSAASASSHLIDASLAIATRSDDSAKKTQQLSTTAAAASPATNPPKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSSGSTLSAPPSKSAPHTFHGALALAHHPYEEAFQHTALLGFHPHAHQHHQQHQLLSADQIAEALPSGGADSGDSYLRKRYREDLFKDDDINTQSQNESGDGSSPKTPNLQLPKQQQQTEAGSGLLRPANLLPATAMWAVAPAPASGPPGSTIWMLPVTSASSSASAAASASTSSGGGGGGSSASLESQMWSFSQSGFMPRFNLPSALEFQGARGGSLQLGSMLMPQQPSQHLGLAMSDSNLGMLAALNAYTRAGFNINSDNHHPHPHHHHHHHHHPLEHQHQHQSQPSESGEDAPNSSQ 505
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01832 505 MobiDBLite consensus disorder prediction 106 130 - -
Spst6g01832 505 MobiDBLite consensus disorder prediction 462 505 - -
Spst6g01832 505 MobiDBLite consensus disorder prediction 131 146 - -
Spst6g01832 505 MobiDBLite consensus disorder prediction 68 88 - -
Spst6g01832 505 MobiDBLite consensus disorder prediction 297 326 - -
Spst6g01832 505 MobiDBLite consensus disorder prediction 1 88 - -
Spst6g01832 505 MobiDBLite consensus disorder prediction 469 485 - -
Spst6g01832 505 MobiDBLite consensus disorder prediction 106 146 - -
Spst6g01832 505 ProSiteProfiles TCP domain profile. 134 188 IPR017887 -
Spst6g01832 505 MobiDBLite consensus disorder prediction 292 326 - -
Spst6g01832 505 MobiDBLite consensus disorder prediction 1 28 - -
Spst6g01832 505 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 46 450 IPR005333 GO:0003700
Spst6g01832 505 Pfam TCP family transcription factor 133 259 IPR017887 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Spst6g01832 Spst-Chr6 17489418 17490935 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01832 131 446 TCP Transcription Factor Family AT1G35560 49.057 6.52e-69 223
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Spst6g01832 TCP 3.1e-38 No_clan
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01832 - - ccaj:109804339 596.66
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01832 6 17489418 17490935 Spst6g01832 6 17489418 17490935 ECH