Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01814 ATGCGAGATGGTCACTACCCGCATTCAAAGCTCTCAAATTTACGATTCGGGATGGAGAAATACGAGCTCGTCAAGGATATAGGGTCTGGGAATTTTGGGGTGGCGAGGCTCATGCGTCATAAGGACACCAAGGAGCTTGTTGCCATGAAATACATTGAAAGGGGTCACAAGATTGATGAGAATGTTGCGAGGGAAATCATAAACCATAGAAGTCTTCGCCACCAGAATATTATTCGGTTCAAGGAGGTGGTTTTGACTCCCACACATCTGGGTATTGTAATGGAGTATGCAGCTGGTGGAGAGCTGTTTGAGAGGATTTGCAGTGCTGGAAGATTCAGTGAAGATGAGGCTCGATATTTCTTCCAGCAGCTCATCTCAGGAGTTAGCTACTGTCATTCCATGTCATCTCTGCTTCATTCAAGGCCTAAGTCAACTGTGGGAACCCCAGCCTACATTGCGCCTGACGTTCTTTCACGTAGAGAATATGATGGAAAGTTAGCAGATGTATGGTCCTGTGGAGTGACTCTTTATGTAATGCTGGTGGGAGCATACCCATTTGAAGACCAAGAGGATCCCAAAAATTTTAGGAAAACCATCAACAGAATTATGGCTGTTCAATACAAGATCCCAGACTATGTTCACATATCTCAAGACTGCAGACATCTGCTCTCTCGCATTTTTGTGGCAAATGCAGCTAGGAGAATCACCATTAAGGAAATCAAGTCCCATCCATGGTTTTTAAAGAATTTGCCTAGAGAATTAACAGAAGCAGCACAAGCTGCTTACTACAGAAAAGAAAATCCAACCTTTTCTCTTCAGAGTATAGAAGACATCATGAATATTGTTGAGGAGGCCAAGGTTCCACATCCAGCATCCAGGTCAATTGGAGGATTTGGTTGGGGAGGAGAAGAAGACGAGGATGAAACAAAAGAAGATGCAGAGGCTGAGGCTGAGGCTGAGGCTGATGAAGATGAGTATGTAAAGAGAGTCAAAGAGGCACAGGCAAGCGGGGAATTTCATCACAATGGAAAAAAGTACAAAATGCAAAAGCAGATTAGTTTAACTGAACATAAATCTCGCGATCATTCAAGCTGTAAATCAGCAGGCACGATGAACAATCCAATGAAGGTAACTGAATGA 1140 0.4351 MRDGHYPHSKLSNLRFGMEKYELVKDIGSGNFGVARLMRHKDTKELVAMKYIERGHKIDENVAREIINHRSLRHQNIIRFKEVVLTPTHLGIVMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVSYCHSMSSLLHSRPKSTVGTPAYIAPDVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTINRIMAVQYKIPDYVHISQDCRHLLSRIFVANAARRITIKEIKSHPWFLKNLPRELTEAAQAAYYRKENPTFSLQSIEDIMNIVEEAKVPHPASRSIGGFGWGGEEDEDETKEDAEAEAEAEADEDEYVKRVKEAQASGEFHHNGKKYKMQKQISLTEHKSRDHSSCKSAGTMNNPMKVTE 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01814 379 PANTHER SERINE/THREONINE KINASE 142 329 - -
Spst6g01814 379 MobiDBLite consensus disorder prediction 301 321 - -
Spst6g01814 379 Coils Coil 303 323 - -
Spst6g01814 379 MobiDBLite consensus disorder prediction 292 379 - -
Spst6g01814 379 ProSitePatterns Protein kinases ATP-binding region signature. 27 50 IPR017441 GO:0005524
Spst6g01814 379 ProSiteProfiles Protein kinase domain profile. 21 246 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g01814 379 Gene3D Phosphorylase Kinase; domain 1 7 96 - -
Spst6g01814 379 Gene3D Transferase(Phosphotransferase) domain 1 138 254 - -
Spst6g01814 379 FunFam Serine/threonine-protein kinase SRK2E 18 96 - -
Spst6g01814 379 MobiDBLite consensus disorder prediction 322 364 - -
Spst6g01814 379 Gene3D Transferase(Phosphotransferase) domain 1 99 137 - -
Spst6g01814 379 MobiDBLite consensus disorder prediction 365 379 - -
Spst6g01814 379 SUPERFAMILY Protein kinase-like (PK-like) 18 286 IPR011009 -
Spst6g01814 379 Pfam Protein kinase domain 141 246 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g01814 379 Pfam Protein kinase domain 21 137 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01814 Spst-Chr6 17362924 17368645 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01814 20 249 CBL-interacting serine-threonine protein kinases AT4G24400 37.500 6.13e-52 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Spst6g01814 Pkinase 9.8e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01814 K14498 - gmx:100812259 577.015