Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01808 ATGGGATACATACTTGCTCTTTTTCGAAATCCATCAATATCTTGTTTAACTGTAGAACTAAGAATGGAGGGGAACTTCAGTTCATATAATCCTCAACTAGCCTCCAGCTTGAAGAATAGTTGCAGTAAGCAAGAGCATGACCATTCAGGGGAGGATCATCATCTCAAAGAAGATTACATGTCTCCATCTTTCAATCTGCGGAATATTTCAAAGCTCATTCTTCCTCCACTAGGCGTTTCAAGCCAGAATCTTGTTAACTCAAAAGGATGGATCATATCACCAATGGATTCAAGATACAGGCACAATTACCTTAACACTAAAATCACCATTTGGAAAAACCCTGTGTGTTTTTCTATGTGTTGGGAGAGTTTTATGGTTCTTCTGGTAGCTTATTCTGCATGGGTTTATCCCTTCGAAGTAGCTTTCATGCACAAATCTTCTAACATGAAACTCTATATTGTGGACACTGTTGTTGATCTTTTCTTCGGTATTGACATTGTTTTGACATTCTTCGTGGCTTACATTGATCGAGCAACCCACCTACTAGTTCGAGACAAGAAGAAGATTGTAGTGAGATACTTGTCTACATGGTTCGTGATGGATTTGGCATCAACTATACCATATGAGGCTCTTGGGTATTTGTTCACTGGCAAACACAAAGTGGGTCTCCCATACTTCCTCTTAGGCCTGCTTAGATTTTGGAGATTAAGACGAGTCAAGCAGTACTTCACAAGGCTTGAGAAAGACATCAGGTTCAACTATTTCTGGGTCCGATGTGCCAAGCTTCTTTCTGTAACTCTTTTTTCAATTCATTGTGCTGGGTGTCTATACTACATGCTAGCTGATCGTTATCCCCACCAAGGAAAGACATGGATTGGAGCTGTGAACCCAAATTTCCGAGAGACAAGCCTTCGAATCAGATACATTTCTGCCATGTACTGGTCCATCACTACCATGACCACTGTAGGTTATGGTGACCTTCATGCCGTCAACACCATGGAAATGATCTTCATTATTTTCTACATGCTCTTTAACCTTGGCCTAACTGCTTACTTGATCGGTAACATGACAAATCTTGTTGTTGAAGGAACTCGCCGTACCATGGAATTTAGAAATAGCATTGAGGCAGCCTCAAACTTTGTGTGCCGAAATCGGTTGCCTCCAAGGTTAAAGGAGCAGATCTTGGCTTACATGTGTTTGAGATTTAAGGCAGAAAGTTTGAATCAGCATCAGCTTATTGAGCAGCTACCAAAGTCTATTTGCAAAAGCATCTGCCAGCATTTATTTTTTGCCACGGTGAAGAAAGTCTATCTTTTCAAAGACGTCTCAAAAGAAATTATTTTGTCCCTGGTTGCAAAAATGAAGGCAGAGTACATACCACCAAGAGAGGATGTTATCATGCAAAATGAAGCACCTGATGATCTTTACATTATTGTGTCTGGGGAAGTGGAGATCATCGATAGTGTGATGGAGAAAGAGAGAATTTTAGGGACACTACATACTGGGGACATGTTTGGAGAGGTCGGTGCTCTTTGTTGTAGACCTCAGAGCTTTACCTACAGAACCAAAACTCTCACACAGCTCCTGAGACTGAAGACCAATACCCTTTTAGAAGCAATGCAGATTAAAAGGGAAGACAACATACAAATACTCAAAAATTTTCTTCAGCATTTCAAGCAGCTAAAGGATCTGAGTATCAAAGATTTGGTGGCGGAGAATGCGGAAGAGGAGGACCCTAACATGGCTGTGAACTTGTTAACTGTGGCAAACACAGGCAATGCTGCTTTTCTAGAGGAGCTTCTAAGAGCAGGTCTGGATCCTGACATTGGCGACTCCGAAGGGAAAACTCCATTGCATATAGCAGCATCAAATGGGTATGAAGAGTGTGTTAAAGTCTTACTAAAGCATTCATGCAACATACATATAAGAGACAAGAATGGTAATACTGCACTATGGGATGCTATAGCATCAAAACATTACTCCATCTTTAGACTTCTCTTCCAGCTTGCTGCTCTCTCTGACCACAACACAGCAGGCGATCTCCTTTCTACAGCAGCCAAAAAAAACGAATTAACAGTGATGAAAGATCTTTTAAAACATGGATTAAAAGTTGACTCTAAAGATCATCTTGATGCAACGGCAATCCAAATTGCAATGGCAGAAAATCATGTGGAAATGGTTCAGTTTCTTGTCATGAATGGTGCTGATGTATCTGATGTACATAAACATGACTTTGGTTCATCCACCTTAACTGAAATGCTACATAATTGTGAAATTGGACATCGAATTAATGTAATTGAGTGCATGCCCGATGAAGCTGTAATAAAGGAGAAACATCAAGAGGAGGAACATATTGGAGGAAGATATAATGGACCAAAGATTGCGAGAGTAAGCATATATAGAGGTCACCCTTCAGTAAGAAGAGAGAAGGGTATAATGCAAGCGGGGAAGCTAATAAGGATGCCTGATTCATTACAGGAACTCAAGACTATTGCTGGTGAAAAATTTGGGTTTGATGCAAATGATGCAATGCTGACAAATGAAGAGGGAGCAGAGATAGACTCTGTTGATGTGATCAGAGATAACGATAAACTAGCTCTGCTGCGCTTCCCTTTCCCTTCCATCATTGGAGACTCTGATCAAACACTTAGAGTGCATAATTACCTTTATCTTCATCCTAGCGAAACCCAATCATCACTCTTATTTCTCCTCTTGATTCCACCAACTATCATTCATGGAGCTGTTCAATGTTAA 2754 0.4052 MGYILALFRNPSISCLTVELRMEGNFSSYNPQLASSLKNSCSKQEHDHSGEDHHLKEDYMSPSFNLRNISKLILPPLGVSSQNLVNSKGWIISPMDSRYRHNYLNTKITIWKNPVCFSMCWESFMVLLVAYSAWVYPFEVAFMHKSSNMKLYIVDTVVDLFFGIDIVLTFFVAYIDRATHLLVRDKKKIVVRYLSTWFVMDLASTIPYEALGYLFTGKHKVGLPYFLLGLLRFWRLRRVKQYFTRLEKDIRFNYFWVRCAKLLSVTLFSIHCAGCLYYMLADRYPHQGKTWIGAVNPNFRETSLRIRYISAMYWSITTMTTVGYGDLHAVNTMEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVCRNRLPPRLKEQILAYMCLRFKAESLNQHQLIEQLPKSICKSICQHLFFATVKKVYLFKDVSKEIILSLVAKMKAEYIPPREDVIMQNEAPDDLYIIVSGEVEIIDSVMEKERILGTLHTGDMFGEVGALCCRPQSFTYRTKTLTQLLRLKTNTLLEAMQIKREDNIQILKNFLQHFKQLKDLSIKDLVAENAEEEDPNMAVNLLTVANTGNAAFLEELLRAGLDPDIGDSEGKTPLHIAASNGYEECVKVLLKHSCNIHIRDKNGNTALWDAIASKHYSIFRLLFQLAALSDHNTAGDLLSTAAKKNELTVMKDLLKHGLKVDSKDHLDATAIQIAMAENHVEMVQFLVMNGADVSDVHKHDFGSSTLTEMLHNCEIGHRINVIECMPDEAVIKEKHQEEEHIGGRYNGPKIARVSIYRGHPSVRREKGIMQAGKLIRMPDSLQELKTIAGEKFGFDANDAMLTNEEGAEIDSVDVIRDNDKLALLRFPFPSIIGDSDQTLRVHNYLYLHPSETQSSLLFLLLIPPTIIHGAVQC 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01808 917 Gene3D - 119 361 - -
Spst6g01808 917 Gene3D - 582 757 IPR036770 -
Spst6g01808 917 ProSiteProfiles Ankyrin repeat region circular profile. 710 738 - -
Spst6g01808 917 Pfam Cyclic nucleotide-binding domain 458 541 IPR000595 -
Spst6g01808 917 PANTHER POTASSIUM CHANNEL AKT1 66 867 IPR045319 GO:0005249|GO:0006813
Spst6g01808 917 ProSiteProfiles cAMP/cGMP binding motif profile. 438 557 IPR000595 -
Spst6g01808 917 ProSiteProfiles Ankyrin repeat region circular profile. 613 645 - -
Spst6g01808 917 FunFam Potassium channel KAT3 120 362 - -
Spst6g01808 917 Pfam KHA, dimerisation domain of potassium ion channel 796 866 IPR021789 -
Spst6g01808 917 FunFam Potassium channel KAT2 426 562 - -
Spst6g01808 917 SUPERFAMILY cAMP-binding domain-like 365 557 IPR018490 -
Spst6g01808 917 ProSiteProfiles KHA domain profile. 796 885 IPR021789 -
Spst6g01808 917 Pfam Ion transport protein 119 367 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Spst6g01808 917 SMART cnmp_10 438 555 IPR000595 -
Spst6g01808 917 CDD CAP_ED 438 551 IPR000595 -
Spst6g01808 917 SMART ANK_2a 710 739 IPR002110 GO:0005515
Spst6g01808 917 SMART ANK_2a 613 642 IPR002110 GO:0005515
Spst6g01808 917 SMART ANK_2a 580 609 IPR002110 GO:0005515
Spst6g01808 917 SMART ANK_2a 646 677 IPR002110 GO:0005515
Spst6g01808 917 ProSiteProfiles Ankyrin repeat profile. 710 742 IPR002110 GO:0005515
Spst6g01808 917 PRINTS EAG/ELK/ERG potassium channel family signature 155 165 IPR003938 GO:0005249|GO:0006813|GO:0016020
Spst6g01808 917 PRINTS EAG/ELK/ERG potassium channel family signature 352 361 IPR003938 GO:0005249|GO:0006813|GO:0016020
Spst6g01808 917 PRINTS EAG/ELK/ERG potassium channel family signature 166 175 IPR003938 GO:0005249|GO:0006813|GO:0016020
Spst6g01808 917 PRINTS EAG/ELK/ERG potassium channel family signature 308 325 IPR003938 GO:0005249|GO:0006813|GO:0016020
Spst6g01808 917 PRINTS EAG/ELK/ERG potassium channel family signature 334 345 IPR003938 GO:0005249|GO:0006813|GO:0016020
Spst6g01808 917 SUPERFAMILY Voltage-gated potassium channels 118 361 - -
Spst6g01808 917 Pfam Ankyrin repeats (3 copies) 589 669 IPR002110 GO:0005515
Spst6g01808 917 SUPERFAMILY Ankyrin repeat 545 744 IPR036770 -
Spst6g01808 917 PRINTS Ankyrin repeat signature 726 740 IPR002110 GO:0005515
Spst6g01808 917 PRINTS Ankyrin repeat signature 614 629 IPR002110 GO:0005515
Spst6g01808 917 Gene3D Jelly Rolls 406 581 IPR014710 -
Spst6g01808 917 ProSiteProfiles Ankyrin repeat profile. 613 645 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01808 Spst-Chr6 17193025 17202165 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01808 22 618 Ion Channels AT4G22200 68.823 0.0 840
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01808 K21867 - gmx:100798422 1437.55