Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01772 ATGGCCCAGGGAAGAGGATTCAGTGCAATGATTTTCTTGTTCTGTGTGTTGGTGCTTTCCTCTGAGAAAGCTCATGCAACAACCTATGTGGTTGGGGACAATGATGGTTGGAACATGCACCCACAAAACTGGCCCATTGGAAAGAATTTTAAGGCTGGTGATATACTAGTATTCAACTATAATCCTCAGCTACACGACGTAGTGATAGTGGATGAAGGTGGATACAAATCATGCACAGTTCCAAAAGGAGCAAAAAGGTATAATTCAGGGCATGATCAAATCAAACTTGCCGGAGGACCAACCTACTTCATCTGCTCTTTTCCTGGACCTCTGATTGCAGAGCCGGAAGCCAACCATGGGGAATCCGTGACACGGAGCAATGATGCTCAAATCGCTCCGCTGCCTCGACTCTCATTTCAGATGAGCATTCTTCTCAAGTTGGCGCAGGTGTCCGATGTACTAGCTCTGCTCCAACCAATCCGGAGACTACAAGACCTTCACCTCAATCTCCACCGGTTCCCACCGAAAACAAAGCATTACCTAAGCAAGAGTGGAATGGAAGAAAGCTGTCCTTATCTTCTCCTCCAACCAGTATCTCCTCCCTGA 606 0.4703 MAQGRGFSAMIFLFCVLVLSSEKAHATTYVVGDNDGWNMHPQNWPIGKNFKAGDILVFNYNPQLHDVVIVDEGGYKSCTVPKGAKRYNSGHDQIKLAGGPTYFICSFPGPLIAEPEANHGESVTRSNDAQIAPLPRLSFQMSILLKLAQVSDVLALLQPIRRLQDLHLNLHRFPPKTKHYLSKSGMEESCPYLLLQPVSPP 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01772 201 PANTHER BLUE COPPER PROTEIN 26 109 IPR039391 GO:0009055
Spst6g01772 201 Gene3D - 27 121 IPR008972 -
Spst6g01772 201 ProSiteProfiles Phytocyanin domain profile. 27 129 IPR003245 GO:0009055
Spst6g01772 201 FunFam basic blue protein-like 27 113 - -
Spst6g01772 201 CDD Plantacyanin 27 109 IPR041844 -
Spst6g01772 201 Pfam Plastocyanin-like domain 42 109 IPR003245 GO:0009055
Spst6g01772 201 SUPERFAMILY Cupredoxins 28 109 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01772 Spst-Chr6 16912120 16920013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01772 9 107 Phytocyanin Superfamily AT1G17800 38.462 3.75e-19 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01772 - - pvy:116113980 135.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01772 6 16912120 16920013 Spst6g01772 6 16912120 16920013 ECH
Spst6g01772 6 16912120 16920013 Spst3g01547 3 18869621 18870287 PCT