Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01763 ATGGGTAATGCAATTAGAAAATTTGACGCGGCGATTAAGAGTCACAGAGATTCAATTTTGCGGAAAGGAGAATCCCGTGTTCGTGGTTTTGGCTCCGCAGTAGACAGTGCCAAAAGGAGTAGGGCCATGCCTAATTCGGAAACATCCCCTGTCCATGGATTCGATTCGGCAGTGGACACGGTCGTAAGGAGTAGGGCTACGCCAAATTGGGAAACAACCCCTGTACATGGATTTGGTTCCGCAGTGGACAGTGCCATAAGGAGCAAGAGTGAGCCAAATTTTGAAACAATCCCTGTCCGTGGATTTGGTTCTGCAGTGGACAGTGCCATAAGGAGCAAGAGTGAGCCAAATTTTGAAACAGTCCCTATCCGTGGATTTGGTTCTGCAGTGGACGGTGCCATAAGGAGCAAGACTGAGCCAAATTTTGAAACATCTCACGCTGTTTATAGTTATGGTTGGGTAGTGGACAATGCAATTGGGAGTAAGATTGCGCCAAATCCCCCTCCTGTCCATGGTTTCGCTTCGGAAGTGGAGCATGCGATTGGTAGTGACGTTGGTGGTGGTGAAGCTGAAAATGAAATTGAAGCGGTTACTGGTCACGATCTGGGTCCCAATAGAGATGGGTATTATTCAGGGTCATGGCAAAAGGGCGACATTTTAGGGAAGGGCTCCTTCGGCACCGTCTACGAAGGCTTCACCGATGATGGAAACTTCTTTGCTGTAAAGGAAGTGTCTTTGCTGGATCATAGAAGCCAGGGCAGAGAGAGCATTTTCCAACTTCGGCAGGAAATATCTCTTTTGAGTCAGTTCCGGCATGACAACATAGTTCAATATCTAGGCACAAACAAGGATAATGATAAGCTGTATATCTTCCTCGAGCTTGTAACAAAAGGATCATTAGCATTTCTCTACCAAAGGTATTGTCTAGTGGACTCTCAAGTTTCTGCATATACAAGGCAAATTTTAAGTGGCTTGAAGTATCTTCATGATCGTAATGTGGTTCACAGGGACATCAAGTGTGCCAATATATTGGTTGATGCAAGTGGGTCAGTCAAGCTCGCAGATTTTGGTTTGGCAAAGGTTGCCAAGTTGAATGATGTTAAATCAGTCGGAGGCTCCCTGTACTGGATGGCCCCTGAGGTTGTTACAATGAGGAACCATGGATATGGACTAGCAGCCGATATATGGAGCTTAGGATGTACGGTCTTGGAGATGCTGACAAGGAAACCCCCTTACTCTCATTTGGGAGAATGTCTGCTGGATGCACAATTTCGAATTGGCCGGGGTAAACTTCCACCTGTTCCGGAATCGTTGTCAACAGATGCCCGAGATTTCATTCTTACATGTTTACAAGTTAACCCAAACAAACGCCCAACCGCTGCTCAACTATTGGACCATCCATTTGTAAATATAAAGATGTAG 1422 0.4585 MGNAIRKFDAAIKSHRDSILRKGESRVRGFGSAVDSAKRSRAMPNSETSPVHGFDSAVDTVVRSRATPNWETTPVHGFGSAVDSAIRSKSEPNFETIPVRGFGSAVDSAIRSKSEPNFETVPIRGFGSAVDGAIRSKTEPNFETSHAVYSYGWVVDNAIGSKIAPNPPPVHGFASEVEHAIGSDVGGGEAENEIEAVTGHDLGPNRDGYYSGSWQKGDILGKGSFGTVYEGFTDDGNFFAVKEVSLLDHRSQGRESIFQLRQEISLLSQFRHDNIVQYLGTNKDNDKLYIFLELVTKGSLAFLYQRYCLVDSQVSAYTRQILSGLKYLHDRNVVHRDIKCANILVDASGSVKLADFGLAKVAKLNDVKSVGGSLYWMAPEVVTMRNHGYGLAADIWSLGCTVLEMLTRKPPYSHLGECLLDAQFRIGRGKLPPVPESLSTDARDFILTCLQVNPNKRPTAAQLLDHPFVNIKM 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01763 473 ProSitePatterns Serine/Threonine protein kinases active-site signature. 333 345 IPR008271 GO:0004672|GO:0006468
Spst6g01763 473 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 116 471 - -
Spst6g01763 473 Gene3D Transferase(Phosphotransferase) domain 1 212 473 - -
Spst6g01763 473 SMART serkin_6 214 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g01763 473 ProSiteProfiles Protein kinase domain profile. 214 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g01763 473 Pfam Protein kinase domain 215 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g01763 473 SUPERFAMILY Protein kinase-like (PK-like) 212 469 IPR011009 -
Spst6g01763 473 ProSitePatterns Protein kinases ATP-binding region signature. 220 242 IPR017441 GO:0005524
Spst6g01763 473 FunFam Mitogen-activated protein kinase 1, putative, expressed 212 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01763 Spst-Chr6 16834744 16838286 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01763 213 469 MAP Kinase Kinase Kinase AT4G08500 68.605 2.26e-118 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Spst6g01763 Pkinase 3.6e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01763 - K13414 vra:106774995 533.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01763 6 16834744 16838286 Spst6g01763 6 16834744 16838286 ECH
Spst3g00296 3 5210205 5215022 Spst6g01763 6 16834744 16838286 PCT