Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01762 ATGGGGCTTGCGTATGGCGTTGTGTGCAGTGCCGTCTCTGGGTTGGGAGAGGAACAGAGGAAGAGAAAGAGTCAGTGCGTTGAGCGTGTGCGTCACAAGATAATGGAAGGTGACCGGAAGCGGTTCAAGCCGCGCCTTGAGCGGCGGAACGCCATGAAGAACATCGATTACCCGGTGAAGGAGGATGAAGACACTGATATCGACATAGACATAGGTCGTTTGAATCAAAGGAGTTTCCGAGTGAAAGGAATCGACGGCGAATTCGACCGAATCTTTCGGAGCCTGGGCCTGTCTGGGCCTGAGGACTTTGCCATCCCAGCTGCGGCTTGGGAAGAGGCCCAGGCCCTTAAGGCCCGCAGCACCGTCAACCTTCAACTCGAACCGTTACAAAGTAAAAAACAGAGAGAGGAGGGAATAAAGGGCGTTAGGCCTCCCGTTTTGGAACCGCCGCAGGTTGCCTCTGCTTGGAACTCCCAGCAACACGCGGAGAGGGACCCACTTTCTTATTCCGTATCACGTGACGATGATATTGACGTTGTTGTTGAAGCTGAAATTGAAGAGGTTTCTGCTTTGGTTGAGAACGACTCGTTTGATATTCATAATCTTTCGCCGAATGGAAACGGGTATTTCCAGTCGTGGCAAAAGGGCGAGATCTTGGGACGGGGCTCCTTCGGAACTGTTTACGAAGGCTTCACCCATGATGGGAACTTTTTTGCTGTAAAGGAGGTGTCTTTACTGGACGACGGAAGCCAGGGCAAACAAAGTATTTTCCAACTTCAGCAGGAAATCTCTCTTTTGAGTCAGTTCCGACACGACAACATTGTTCGATATCTTGGCACTGACAAGGATAATGATAAACTGTATATCTTCCTTGAGCTTGTAACAAAAGGATCATTGGCAAGTCTCTATCAAAAATATCGTTTAGGGGACTCTCAAGTTTCTGCATACACAAGACAGATTTTGAGTGGCTTGAAGTATCTTCATGATCGTAATGTGGTTCACAGGGACATCAAGTGTGCCAATATATTGGTTGATGCAAATGGGTCCGTCAAGCTTGCAGATTTTGGATTGGCGAAGGCAACCAAGTTGAATGATGTTAAATCAAGTAAAGGCTCCCCGTACTGGATGGCCCCTGAGGTTGTTAACTTGAGAAACCGTGGATACGGACTTGCGGCCGACATATGGAGCTTAGGATGTACAGTCTTAGAGATGTTGACAAGACAACCTCCTTACTCTCATTTGGAAGGAATGCAAGCACTATTTCGAATTGGCAGCGGTCAACCTCCACCTGTTCCAGAATCTTTGTCAAGAGATGCCCGAGATTTCATTCTTAAATGCTTACAAGTTAACCCAAACAAACGGCCAACTGCTGCTCGACTATTGGAACATCCATTTGTAAAGAGACCACTTTTATCTCCCATAAGTCCTGTTTCTCCGAGTATTAATCTTTTACTGTCTTAA 1461 0.4723 MGLAYGVVCSAVSGLGEEQRKRKSQCVERVRHKIMEGDRKRFKPRLERRNAMKNIDYPVKEDEDTDIDIDIGRLNQRSFRVKGIDGEFDRIFRSLGLSGPEDFAIPAAAWEEAQALKARSTVNLQLEPLQSKKQREEGIKGVRPPVLEPPQVASAWNSQQHAERDPLSYSVSRDDDIDVVVEAEIEEVSALVENDSFDIHNLSPNGNGYFQSWQKGEILGRGSFGTVYEGFTHDGNFFAVKEVSLLDDGSQGKQSIFQLQQEISLLSQFRHDNIVRYLGTDKDNDKLYIFLELVTKGSLASLYQKYRLGDSQVSAYTRQILSGLKYLHDRNVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSSKGSPYWMAPEVVNLRNRGYGLAADIWSLGCTVLEMLTRQPPYSHLEGMQALFRIGSGQPPPVPESLSRDARDFILKCLQVNPNKRPTAARLLEHPFVKRPLLSPISPVSPSINLLLS 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01762 486 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 152 470 - -
Spst6g01762 486 MobiDBLite consensus disorder prediction 152 166 - -
Spst6g01762 486 SMART serkin_6 213 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g01762 486 FunFam Mitogen-activated protein kinase 1, putative, expressed 211 479 - -
Spst6g01762 486 ProSitePatterns Serine/Threonine protein kinases active-site signature. 332 344 IPR008271 GO:0004672|GO:0006468
Spst6g01762 486 MobiDBLite consensus disorder prediction 135 168 - -
Spst6g01762 486 SUPERFAMILY Protein kinase-like (PK-like) 211 476 IPR011009 -
Spst6g01762 486 Gene3D Transferase(Phosphotransferase) domain 1 210 477 - -
Spst6g01762 486 ProSiteProfiles Protein kinase domain profile. 213 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g01762 486 ProSitePatterns Protein kinases ATP-binding region signature. 219 241 IPR017441 GO:0005524
Spst6g01762 486 Pfam Protein kinase domain 214 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01762 Spst-Chr6 16826908 16830286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01762 139 470 MAP Kinase Kinase Kinase AT4G08500 57.412 1.14e-134 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Spst6g01762 Pkinase 3e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01762 - K13414 var:108347588 727.628