Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01751 ATGGCATCCTCCAAGGTGGTGCTCACCACGAATCCCGATGTGGCACCGCAGAGTTCCATTTCGAGCCAGGTATGGGACGAGGTGGTTGCCGCCACTGAGTCTCAGGACATGTCCGTCACCCTCCACGATTTGTTGTTGACCTCCGTTGCCAGAAACGACGCCGTTCCGCCCTCTCACGGGGGAAGGGGAAAGAGAAAGGCTGTGGAGGAACCCGTCGTCGATAAGGCCACTCTTCAGAAACAGAGAAGGATGATCAAAAACAGAGAATCTGCCGCTAGGTCCAGGGAACGCAAACAGGCTTACACAGTTGAGTTAGAGTCTCTGGTTACAATTCTCGAGCAAGAGAAAGCTCGATTGTTAAAGGAAGAGGCTGATAGGAGAAGGCAGAGGTTCAATCAGCTCATGGAGTGGCTTATTCCAGTTGAGGAGAAGAGTAAACCTAGACGAATGCTTCGGAGAGTGAATTCAGCACAGTGGTGA 480 0.5208 MASSKVVLTTNPDVAPQSSISSQVWDEVVAATESQDMSVTLHDLLLTSVARNDAVPPSHGGRGKRKAVEEPVVDKATLQKQRRMIKNRESAARSRERKQAYTVELESLVTILEQEKARLLKEEADRRRQRFNQLMEWLIPVEEKSKPRRMLRRVNSAQW 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01751 159 SMART brlzneu 75 139 IPR004827 GO:0003700|GO:0006355
Spst6g01751 159 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 77 129 IPR004827 GO:0003700|GO:0006355
Spst6g01751 159 Gene3D - 78 134 - -
Spst6g01751 159 Pfam bZIP transcription factor 76 122 IPR004827 GO:0003700|GO:0006355
Spst6g01751 159 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 82 97 IPR004827 GO:0003700|GO:0006355
Spst6g01751 159 SUPERFAMILY Leucine zipper domain 79 130 IPR046347 GO:0003700|GO:0006355
Spst6g01751 159 Coils Coil 102 122 - -
Spst6g01751 159 CDD bZIP_plant_BZIP46 79 121 - -
Spst6g01751 159 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 53 159 IPR043452 GO:0003700|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01751 Spst-Chr6 16778297 16779973 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01751 60 159 bZIP Transcription Factor Family AT5G44080 59.804 2.81e-31 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Spst6g01751 bZIP_1 4.7e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01751 K14432 - gmx:100101878 196.823