Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01750 ATGGGAAAAAGAGAAAGAAATGGAAAGAAAGAAGAAGAAATTGAGAAGGAAATGATGAGTGGGGAGATAAAGTTTGAGGTGGAGGAGAGGAAATGCATAAAACCCTCCACAGCCACACCACCACATCACAAAACCTTCAAACTCTCTTTACTTGACAAGCTTTCCCCTGACATCCATGGCAACATGACCCTCTTCTACCCTCACACCACCCACGCGCTTCCACACTTCTCCACCCAATCCCAACTCCTTCAAACCTCCCTCTCCCAAACGTTGACCCGCTTCTACCCTGTCGCCGGAAACCTACATGACTCCGACACCCTCCACTGCAACGACGCCGGCGCCATCTTCATCGAATCCCGGACCAACGCCTCTCTCTCCGACATCCTCAAAGCTCCAGACTTCAACACCCTCCAATGTCTCCTCCCCTCCGCCGACAACCAAACTTTGACAACCTCAAACGCCGCCATGCTCCTCGTACGCTTCACCTCCTTCCGCTGCGGCGGCACCGCCTTAACCATTTCTCTCTCCCACAAAATCGCCGACATAGCATCCGTCATTGCACTCCTCAAAACCTGGACCGCTGCGTGCGCCGGAGAAACCCTGCCGGCCATCCCCGAACTCGCTGCAGGCGCCGCGCTTTTTCCTCCGAGAGAGCTTCCCGTCGTGACCGCGTCCATAAAACCCGTCTCGTCGGACAATTTCACTTCGAGGAGGTTCGTTTTCGACGCGTCCAAGGTTAAAGTACTAAAGAAGAGAATTCGAGAAGGTTTGGTGTTTGAACCTTCGAGGGTGGAGGTGGTGCTGGCTCTCATATGGAAATGCGCTCTCTCGGCTTCTCGCTCGAAAACGGCGTCGTTCAAGAGTTCGGTTTTGTTCCAAGCGGTGAACCTCCGTCCCCGGATGGAGCCGGCGGTGGCGGACGGCGCCTTGGGGAACTTCGTGTGGCCGTTTGTGGTGACGGTGGAGGAGGAGGCGCACTTGGATTTGCACGTGATGGTGAAGAGGATGAGGGAGAGTATGAGGGTGTTTGTCGAAACTAAAGCAAAGAGGTTCAAAGAGGATGGAGCGTTTGGAGTGGTTATGGAGAGTCTGAAAGAGAGAGGTGAAGTTTTGAAGAAGAAGAATAACAACAGTGTTGTTTATAAGTGTTCGAGTTGGTGCAAGTTCCCTGTGCTTGAGGTTGATTTTGGTTGGGGAGAAGCAGCGTGGATGTGTAGTGTGAATAAGATGGTGAGTAACACAGTTGCTTTGATGGATACCAGGGATGGTGGGGTTGAAGCTTTCGTCACTCTCGATCATCAAGACATGCTTTTCTTTGAACAAGATGAGCAACTTCTACACTATGCTTTGCATAATCCTTCTGTTTTCCTCTGA 1374 0.5175 MGKRERNGKKEEEIEKEMMSGEIKFEVEERKCIKPSTATPPHHKTFKLSLLDKLSPDIHGNMTLFYPHTTHALPHFSTQSQLLQTSLSQTLTRFYPVAGNLHDSDTLHCNDAGAIFIESRTNASLSDILKAPDFNTLQCLLPSADNQTLTTSNAAMLLVRFTSFRCGGTALTISLSHKIADIASVIALLKTWTAACAGETLPAIPELAAGAALFPPRELPVVTASIKPVSSDNFTSRRFVFDASKVKVLKKRIREGLVFEPSRVEVVLALIWKCALSASRSKTASFKSSVLFQAVNLRPRMEPAVADGALGNFVWPFVVTVEEEAHLDLHVMVKRMRESMRVFVETKAKRFKEDGAFGVVMESLKERGEVLKKKNNNSVVYKCSSWCKFPVLEVDFGWGEAAWMCSVNKMVSNTVALMDTRDGGVEAFVTLDHQDMLFFEQDEQLLHYALHNPSVFL 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01750 457 PANTHER F21J9.9 28 449 - -
Spst6g01750 457 Pfam Transferase family 24 444 - -
Spst6g01750 457 Gene3D - 231 449 IPR023213 -
Spst6g01750 457 Gene3D - 22 221 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01750 Spst-Chr6 16774423 16775796 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01750 23 441 Monolignol Biosynthesis Gene Families AT5G48930 24.009 3.53e-24 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01750 - - gmx:100808502 646.736