Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01739 ATGTACATTATGATATATCAGATGGTCATGGAGGTTCAGGACCACAACCCTTCATCTATTTACTTCGTTGCCTTCGCTTTCTGCTTTCTCTTCGTCTTATTCAAGATCGTTCAAAGTTGGGGTTCCTACAACTCCTCTACCAATTTACCCCCAGGACCTTGTACACTACCTCTCATAGGAAATTTACACCATTTTGTAGGTTCAGTGCCTCATCGCTCCTTAAAAAAATTGGCAGACAAGTATGGCCCGTTAATGACCATAAAACTAGGAGAGGTGTCGAACATCATAGTCACTTCACCGGAGATAGCCCAAGAGATTTTGAAAACACATGATCTCACTTTTTGTGATAGGCCTAGCCTTTCATCCTCCAGAATTGTTTCTTACAATTATACTAACCTTGCCTTCGCTCGATACGGAGAATATTGGAGGCAACTACGAAAGATATGCACAGTGGAGCTACTAACGACGAAGCGCGTGCAATCTTTCCGCTCCTTAAGGGAAGAGGAGGCATCAGAAATGGTTAAAAAAATAGCTGCAAGTGAAGGGTGCGTTATTAATCTCACCCACAACATTTACCCGATGACTTATGGAATAACGGCACGAGCAGCTTTTGGTAAAAAGAGCAGATATCAGCAAGTGTTCATATCAAAGATCGAGGAGCAATTGAAGCTCATGGGAGGGTTTTCAGTTGCTGAACTCTATCCTTCTAGCAGATTGCTTCAAATGATGGCGAATACCAAACTTGAGAAAGTCCACAGACACATTGATAGGATTTTGCAGGACATCATCGAGGAACACAGAAATAGAAGCAGCAGCGACCGTGAAGCAGTGGAAGATCTGGTTGATGTTCTTCTCGCGTATCAGGAAAAGGGTTCCACATCTCACTTAACCGATGACAACATTAAAGCCGTCATCCAGGACATATTCACTGGTGGAGGCGAAACTTCATCTTCTGTGGTGGAATGGGGGATGTCGGAATTGATAAGAAGTCCAAGAGCGATGGAAAAAGCACAAGCTGAGGTGAGAAGAGTGTATGATAGCAAGGGATATGTGGATGAGACAGAGTTAGAGCAGCTGGTATACTTAAAGTCCATAATCAAAGAAATATTGAGGTTACACCCACCTGTGCCACTGCTAGTTCCTAGAGAAAGTAGAGAAAGGTGCCAAATTAATGGATATGAGATACCCTCTAAGACTAGGGTCATCCTCAATGCTTGGGCAATTGGAAGAGATCCTAAGTATTGGAGTGAAGCTGATAGTTTTATACCCGAGAGGTTTCATAACAACTCCATTGATTTCAGAGGCACAGACTTTGAATATATCCCTTTTGGTGGTGGAAGGAGGATTTGCCCAGGCATTTTGTTTGCCATCCCCAACATTGAGTTGCCACTTGCTAGTTTACTTTACCATTTTGATTGGAGGCTTCCCAACCAAATGAAGAATGAAGAACTTGACATGACTGAGTGTAGTGGAATTACTCTCAGAAGAGAGAATGATCTTTACTTGATTCCCATCATCACTCGTCCACCTTCAAATATGTAA 1542 0.4261 MYIMIYQMVMEVQDHNPSSIYFVAFAFCFLFVLFKIVQSWGSYNSSTNLPPGPCTLPLIGNLHHFVGSVPHRSLKKLADKYGPLMTIKLGEVSNIIVTSPEIAQEILKTHDLTFCDRPSLSSSRIVSYNYTNLAFARYGEYWRQLRKICTVELLTTKRVQSFRSLREEEASEMVKKIAASEGCVINLTHNIYPMTYGITARAAFGKKSRYQQVFISKIEEQLKLMGGFSVAELYPSSRLLQMMANTKLEKVHRHIDRILQDIIEEHRNRSSSDREAVEDLVDVLLAYQEKGSTSHLTDDNIKAVIQDIFTGGGETSSSVVEWGMSELIRSPRAMEKAQAEVRRVYDSKGYVDETELEQLVYLKSIIKEILRLHPPVPLLVPRESRERCQINGYEIPSKTRVILNAWAIGRDPKYWSEADSFIPERFHNNSIDFRGTDFEYIPFGGGRRICPGILFAIPNIELPLASLLYHFDWRLPNQMKNEELDMTECSGITLRRENDLYLIPIITRPPSNM 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01739 513 Gene3D Cytochrome P450 43 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01739 513 CDD CYP71-like 80 500 - -
Spst6g01739 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Spst6g01739 513 PRINTS E-class P450 group I signature 78 97 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01739 513 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01739 513 PRINTS E-class P450 group I signature 194 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01739 513 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01739 513 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01739 513 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01739 513 PRINTS E-class P450 group I signature 102 123 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01739 513 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01739 513 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01739 513 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01739 513 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01739 513 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01739 513 SUPERFAMILY Cytochrome P450 50 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01739 513 PANTHER OS08G0105600 PROTEIN 73 508 - -
Spst6g01739 513 Pfam Cytochrome P450 50 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01739 513 FunFam Cytochrome P450 71D8 42 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01739 Spst-Chr6 16572420 16574446 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01739 25 504 Cytochrome P450 AT3G26300 38.211 8.58e-130 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01739 - - gmx:606548 739.954