Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01737 ATGCAGTTGAAAAGCAACTGCAGGGAATTCATTTGCATAGATTGTGAAATCTTTCGCGTGACGGAATCTGAGGCGGCTATAAAAGAAGGGACGTTGAGTTCCGTCACTCTCTTTGCCCCATATTATTGCATCTCTCTCGTGCCAGAGGCCGAGTCTTTCGCCGTTTCTCTCTTTCCTTTGTCGATTCAAACGCTTCTCTTTGCGGTGCTTTGTGTTTCTGGTATCAATATGGTTGGGAGTGCTGGCGCTTTAAATGAGGATTTGAGAATCAACGGAGAAGTGGAACCGTTGCCTGAGGATTTTGATGCAACAGCTTTAGTCAGGGATCCTGTGCCTTCCACAGTTGCAGACAATGACAGTGTCAACGAGGAGGGGCTGATCAATCAGGGAAAAGAGAAAAGATTGATAGTTCTGGGAAGAAATATTCATACCATGTCTCTAGAAGTCACAGAGCCAGATGCAGATGACGAGGTTACTGGGGACAGGGAAGCTCATATGGCAAGCGTATTGGCCAGATACAAAAGAGCTTTGACTGAAAGGACAAAACATCATTTAGGGTACCCTTATAATTTGGATTTCGATTATGGTGCCCTCTCACAACTTCAGCACTTTTCCATAAACAACCTGGGAGATCCATTTATTGAAAGCAATTATGGTGTCCACTCCCGACAGTTTGAAGTTGGTGTTTTGGATTGGTTTGCCCGACTATGGGAACTGGAGAAAAATGAGTACTGGGGCTATATAACAAACTGTGGTACAGAAGGAAATCTCCATGGCATCCTAGTTGGGAGAGAGGTTTTTCCAAATGGGATTTTGTATGCCTCACGAGAGTCACATTATTCTATTTTCAAAGCTGCTCGAATGTACAGAATGGAATGTGTGAAGGTTGATACTCTTTGGTCTGGTGAGATTGATTGTGATGATTTCAAGGCCAAGCTTCTCCGCAATCAGGACAAGCCAGCGATTATAAATGTCAACATAGGTACAACTGTGAAGGGAGCTGTGGACGATCTTGATCTGGTGCTAAAGAAACTTGAAGAAGCTGGATTTTCGCAAGACAGATTCTACATCCATTGTGACGGTGCTTTGTTTGGTCTCATGATGCCTTTCGTGAAACGAGCTCCTAAAGTTACTTTTAAGAAGCCTATTGGCAGTGTCAGTGTTTCTGGCCACAAATTTGTAGGTTGTCCCATGCCTTGTGGTGTGCAGATAACAAGATTGGAGTATGTCAATGCTCTTTCCAGGGATGTGGAATACCTTGCTTCTAGGGATGCCACGATCATGGGTAGTCGGAATGGCCATGCTCCCATATTCCTTTGGTATACCTTGAATAGAAAAGGATATAGAGGTTTCCAGAAAGAAGTACAGAAATGCTTGCGAAACGCACACTACTTCAAAGATCGCCTTGTTGAGGCTGGGATTGGTGCAATGCTTAATGAGCTAAGCAGCACGGTTGTGTTTGAGAGGCCGCATGATGAGGAATTTATACGCAAGTGGCAGTTGGCATGCAAGGGGAATATTGCACATGTGGTGGTCATGCCAAACATCACCATTGAGAAGCTGGATGATTTTCTGAACGAGCTTCTAGAGAAGCGTGCTACCTGGTTTCAAGATGGGAAGGTTCAACCTTACTGTATATCGTCTGATGTAGGTGAAAAGAATTGCCTATGTGCTTTGCACAAGTAG 1686 0.4425 MQLKSNCREFICIDCEIFRVTESEAAIKEGTLSSVTLFAPYYCISLVPEAESFAVSLFPLSIQTLLFAVLCVSGINMVGSAGALNEDLRINGEVEPLPEDFDATALVRDPVPSTVADNDSVNEEGLINQGKEKRLIVLGRNIHTMSLEVTEPDADDEVTGDREAHMASVLARYKRALTERTKHHLGYPYNLDFDYGALSQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELEKNEYWGYITNCGTEGNLHGILVGREVFPNGILYASRESHYSIFKAARMYRMECVKVDTLWSGEIDCDDFKAKLLRNQDKPAIINVNIGTTVKGAVDDLDLVLKKLEEAGFSQDRFYIHCDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRLEYVNALSRDVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAHYFKDRLVEAGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHVVVMPNITIEKLDDFLNELLEKRATWFQDGKVQPYCISSDVGEKNCLCALHK 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01737 561 PANTHER - 129 561 - -
Spst6g01737 561 Pfam Pyridoxal-dependent decarboxylase conserved domain 271 481 IPR002129 GO:0016830|GO:0019752|GO:0030170
Spst6g01737 561 Gene3D - 199 443 IPR015421 GO:0003824
Spst6g01737 561 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 385 406 IPR021115 GO:0016831
Spst6g01737 561 SUPERFAMILY PLP-dependent transferases 181 531 IPR015424 -
Spst6g01737 561 Gene3D Aspartate Aminotransferase, domain 1 444 532 IPR015422 GO:0003824
Spst6g01737 561 FunFam Serine decarboxylase 1 200 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01737 Spst-Chr6 16554558 16559370 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01737 K25193 - gmx:100785163 927.932
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00319 3 5832914 5835328 Spst6g01737 6 16554558 16559370 PCT