Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01716 ATGAGTGAGCGTGTGAGTGACGAGGCTGTGACAAAGGCCATGGGGGAAATATCAAGCAGGGCTTCTTCACGTAGGCATGGAGATACTTCGCCATACATTCACAAGGTGGAATCTCCTCCTAAGCAAACACTTCTCCAGGAGATTAAATATTCTGTGGTGGAGACTTTCTTCCCAGACAAACCATTAGACAAATTTAAAGACAAAAGTTGGTGTAGAATGTTTCTATTAGGCCTGCAGTCTCTCTTCCCTATTTTTGAATGGGGGAGATATTACAATCTTAAAAAGTTCAAAGGTGATTTCATTTCTGGACTCACTATTGCAAGTCTATGTATACCTCAGGACATTGCATACGCAAAACTAGCGAATTTGGATCCCCAATATGCACTTTATACCAGTTTCGTGACCCCTCTTGTGTATGCTTTTATGGGAAGCTCAAGAGATATTGCCGTTGGACCCGTAGCAGTAATTTCCCTCATGCTTGGGACTATGCTATCCGATGAGATCAGTGACTTCAAAAGTCATGAATACCTGCGTCTTGCATTTACTGCCACCTTCTTCGCAGGAGTCACTCAAATGGCACTTGGTGTTCTCAGGCTTGGTTTCTTGATTGACTTTCTGTCTCATGCTGCCATCGTGGGATTCATGACTGGATCTGCCATTACTATTGCACTGCAACAGCTTAAGGGTTTGCTTGGCATAAAAAACTTCACTAAGAAAACTGATATTGTTTCTGTCATGCGCTCGGTTTTCAGTTCAGTGCACCATGGGTGGAATTGGGAGACAATAGTCATCGGATTAGCATTCTTGGTTTTCCTTCTTGTAGCCAAGCATATTGCTAAAAAGAATAAGAAACTCTTTTGGGTGGCTGCAACTTCTCCGATGATTTCTGTCATAGTGTCTACCGTTTTGGTCTACATAACCAGAGCAGACAAGAAAGGCGTGGCAATTCTGAAACATGTTAAGAAGGGTCTGAATTCATCATCTGCTGGTGAGATTTTTTTCAGTGGAAAATATCTGGGCTCTGGTATTCGGGTTGGTGTGGTGGCTGGCATGGTAGCACTCACGGAAGCTGTATCAATTGGGAGAACATTTGCTGCCATGAAAGACTATTCACTGGATGGCAACCAAGAAATGATGGCAATGGGAGCAATGAACATTATTGGTTCTTTAGCATCTTGTTATGTGTCTACAGCTATCACCGTCACAACAACAAGAGTTGTTTCTGATGTAGGCGGTTTTTCTCGCACGGCAGTGAACAACATGGCCGGTTGTAAAACTGCTGTATCAAACATCGTTATGTCCATTGTTGTGTTATTGACTCTGCTACTCATTACGCCACTATTTAAGTACACTCCAAATGCGGTGCTTGCTTCTATTATAATAGCTGCCGTGCTTGGCCTTGTGAACATTGAAGCTATTATGCATTTATGGAAGATTGACAAGTTCGACTTTGTTGCTTGCATGGGAGCCCTCTTTGGTGTGGTCTTCATAAATGTTGAGATTGGCCTTCTAATTGCGGTGGCTATATCTTTTGCCAAAATCCTTTTACAAGTGACAAGGCCAAGGACTGCAGTACTAGGGAAGCTTCCAGGAACTACAGTTTATAGGAACATACAACAATACCCCAAAGCAACCCAAATTAATGGCATGTTCATTGTCAGGGTTGACTCTGCAATCTACTTCTCAAACTCCAACTACGTTAAGGAGAGAATTTTGAGATTGCTGACTGATGAAGAAGCCCAAAGGACAGCAAATGGATTGTCCAGAATAGAGTATCTCACTGTTGAGATGTCACCTGTTACTGATATCGACACTAGTGGCATCCGGGCCTTTGAAGAGTTATACAAGATCCTTCAGAAAAGAAAAGTCCAGCTTATCTTGGCAAACCCAGGGCCAATTGTAATAGAGAAGCTCCATGCATCAAAGTTAACAGACATCATTGGAGAAAATAACATATTTCTAACAGTGGCTAATGCTGTTTCAACTTTTTCGCCAAAGGGTGAAGGAGTAGTGTGA 2016 0.4241 MSERVSDEAVTKAMGEISSRASSRRHGDTSPYIHKVESPPKQTLLQEIKYSVVETFFPDKPLDKFKDKSWCRMFLLGLQSLFPIFEWGRYYNLKKFKGDFISGLTIASLCIPQDIAYAKLANLDPQYALYTSFVTPLVYAFMGSSRDIAVGPVAVISLMLGTMLSDEISDFKSHEYLRLAFTATFFAGVTQMALGVLRLGFLIDFLSHAAIVGFMTGSAITIALQQLKGLLGIKNFTKKTDIVSVMRSVFSSVHHGWNWETIVIGLAFLVFLLVAKHIAKKNKKLFWVAATSPMISVIVSTVLVYITRADKKGVAILKHVKKGLNSSSAGEIFFSGKYLGSGIRVGVVAGMVALTEAVSIGRTFAAMKDYSLDGNQEMMAMGAMNIIGSLASCYVSTAITVTTTRVVSDVGGFSRTAVNNMAGCKTAVSNIVMSIVVLLTLLLITPLFKYTPNAVLASIIIAAVLGLVNIEAIMHLWKIDKFDFVACMGALFGVVFINVEIGLLIAVAISFAKILLQVTRPRTAVLGKLPGTTVYRNIQQYPKATQINGMFIVRVDSAIYFSNSNYVKERILRLLTDEEAQRTANGLSRIEYLTVEMSPVTDIDTSGIRAFEELYKILQKRKVQLILANPGPIVIEKLHASKLTDIIGENNIFLTVANAVSTFSPKGEGVV 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01716 671 Pfam STAS domain 541 659 IPR002645 -
Spst6g01716 671 SUPERFAMILY SpoIIaa-like 542 664 IPR036513 -
Spst6g01716 671 CDD STAS_SulP_like_sulfate_transporter 541 656 - -
Spst6g01716 671 Gene3D STAS domain 520 666 IPR036513 -
Spst6g01716 671 Pfam Sulfate permease family 96 488 IPR011547 GO:0016020
Spst6g01716 671 ProSiteProfiles STAS domain profile. 540 663 IPR002645 -
Spst6g01716 671 NCBIfam sulfate permease 83 659 IPR001902 GO:0016020|GO:0055085
Spst6g01716 671 PANTHER SULFATE TRANSPORTER 52 662 IPR001902 GO:0016020|GO:0055085
Spst6g01716 671 FunFam Sulfate transporter 31 520 666 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01716 Spst-Chr6 16337822 16341879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01716 15 666 Inorganic Solute Cotransporters AT1G22150 68.654 0.0 882
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01716 K17470 - gmx:100784124 1080.47